Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486837

Identifier: 103486837

GI number: 103486837

Start: 1410076

End: 1410420

Strand: Direct

Name: 103486837

Synonym: Sala_1351

Alternate gene names: NA

Gene position: 1410076-1410420 (Clockwise)

Preceding gene: 103486836

Following gene: 103486839

Centisome position: 42.15

GC content: 64.35

Gene sequence:

>345_bases
ATGATCAGGATCCTTCTCGCTTCGCTCTCCCTGCTCACCCTCGCAGCGTGCGGCAGCAACGATAGCGGCGGCAGTTCGAC
GACGAAGCTCGACGCGGTCGAGGTTCAGCCCGGATCGGTGAGCGATTCGATGATCATCCTCGACGATGCGGTCGGCGACG
GCACCGCGGTCGATAACAGCGTCCCCGACGACGGAACGGGCAAGAAGTCGGCGGAAGCCGATGACGGCGAGGGAGAAGAA
GAAGCCACCCCACCCGCCGAGGCCGACGAAGATCCCGAGGCGGTCGATATGCCCGCAGCGAAAAAGGCGCTCGCTCCCGA
TGCTCCGGCGAAAAAGGGCGAATAG

Upstream 100 bases:

>100_bases
GCTAGGGAAGGCGACGGGTTTTTCCGAGGTCGATGCTGCGCTTGCCCGGACGCTCCCCGCTTTTCTCGACAAGCTGCGGC
CAAGCGATTAGGACCGGCGC

Downstream 100 bases:

>100_bases
GTGCTAGGCTGTAGTGACAATTTAATCATTTGAGCCACAACATTATGCTTGCGAGTTTGATGAAGCCAAGGAAGTTTGCG
GCGAGTTTGTCATGGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE
EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE

Sequences:

>Translated_114_residues
MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE
EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE
>Mature_114_residues
MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE
EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11355; Mature: 11355

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNS
CEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC
VPDDGTGKKSAEADDGEGEEEATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNS
CEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC
VPDDGTGKKSAEADDGEGEEEATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA