| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486837
Identifier: 103486837
GI number: 103486837
Start: 1410076
End: 1410420
Strand: Direct
Name: 103486837
Synonym: Sala_1351
Alternate gene names: NA
Gene position: 1410076-1410420 (Clockwise)
Preceding gene: 103486836
Following gene: 103486839
Centisome position: 42.15
GC content: 64.35
Gene sequence:
>345_bases ATGATCAGGATCCTTCTCGCTTCGCTCTCCCTGCTCACCCTCGCAGCGTGCGGCAGCAACGATAGCGGCGGCAGTTCGAC GACGAAGCTCGACGCGGTCGAGGTTCAGCCCGGATCGGTGAGCGATTCGATGATCATCCTCGACGATGCGGTCGGCGACG GCACCGCGGTCGATAACAGCGTCCCCGACGACGGAACGGGCAAGAAGTCGGCGGAAGCCGATGACGGCGAGGGAGAAGAA GAAGCCACCCCACCCGCCGAGGCCGACGAAGATCCCGAGGCGGTCGATATGCCCGCAGCGAAAAAGGCGCTCGCTCCCGA TGCTCCGGCGAAAAAGGGCGAATAG
Upstream 100 bases:
>100_bases GCTAGGGAAGGCGACGGGTTTTTCCGAGGTCGATGCTGCGCTTGCCCGGACGCTCCCCGCTTTTCTCGACAAGCTGCGGC CAAGCGATTAGGACCGGCGC
Downstream 100 bases:
>100_bases GTGCTAGGCTGTAGTGACAATTTAATCATTTGAGCCACAACATTATGCTTGCGAGTTTGATGAAGCCAAGGAAGTTTGCG GCGAGTTTGTCATGGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE
Sequences:
>Translated_114_residues MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE >Mature_114_residues MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNSVPDDGTGKKSAEADDGEGEE EATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11355; Mature: 11355
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNS CEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC VPDDGTGKKSAEADDGEGEEEATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MIRILLASLSLLTLAACGSNDSGGSSTTKLDAVEVQPGSVSDSMIILDDAVGDGTAVDNS CEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCC VPDDGTGKKSAEADDGEGEEEATPPAEADEDPEAVDMPAAKKALAPDAPAKKGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA