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The map label for this gene is petA [H]

Identifier: 103486831

GI number: 103486831

Start: 1405399

End: 1405956

Strand: Reverse

Name: petA [H]

Synonym: Sala_1345

Alternate gene names: 103486831

Gene position: 1405956-1405399 (Counterclockwise)

Preceding gene: 103486834

Following gene: 103486830

Centisome position: 42.03

GC content: 66.49

Gene sequence:

>558_bases
ATGGCCAGTGAAACTGAACTCAACGCCGGTATCGAGGATGGCGTGCGCCGTCGGGATTTCATCAATATCGCAGCGGTGAG
TTTCGCGGGCGTCGGCGCGGTTGCGGCGGTGCTGCCGCTCGTCAACCAGATGAACCCGTCGGCCGACGTGCTGGCGCTGT
CGTCGACCGAAATCGACATTTCGGCGATCGGCACGGGGCAGGCGATCAAGACGAGCTGGCGCAAGCAGCCGGTGTTCGTG
CGCAACCTGACCGCCGCCGAGATCGCCGAGGCGAACAGCGTGCCGCTGAGCGACCTGCGCGACGCGCAGACGCTCGCCGA
GCGCACCAAGCCCGGCAGGGAAAACTGGCTGATCACCCTTGGCGTCTGCACCCATCTGGGCTGCGTCCCGCTGGGTGCCG
CCGAGGGCGAGAACCGCGGCGATTACGGCGGTTATTTCTGCCCGTGCCACGGTTCGCACTACGACACCGCGGCGCGCATC
CGCAAAGGGCCGGCGCCCACCAACCTGGTCGTGCCGCCTTATGAATTCACCAGCGACACCGTCGTGACGATCGGCTGA

Upstream 100 bases:

>100_bases
TCCCGGAGGGGCCGCCGGGTTGTGCGCTTTCGTGCGCGTGCAACAGAGCGAGCCATTGCTTCGAGAACGATTTCTAGTTC
ACCCATGCAAGGGCAGTCGA

Downstream 100 bases:

>100_bases
GGAGCGAGATAAGATGAGCTTTCCCTGGGCCAAGCAATATGAACCCCAGCAGCCGCTGATGAAGTGGCTGGACGAGAAGC
TGCCGCTGCCGCGCCTCGTC

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MASETELNAGIEDGVRRRDFINIAAVSFAGVGAVAAVLPLVNQMNPSADVLALSSTEIDISAIGTGQAIKTSWRKQPVFV
RNLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITLGVCTHLGCVPLGAAEGENRGDYGGYFCPCHGSHYDTAARI
RKGPAPTNLVVPPYEFTSDTVVTIG

Sequences:

>Translated_185_residues
MASETELNAGIEDGVRRRDFINIAAVSFAGVGAVAAVLPLVNQMNPSADVLALSSTEIDISAIGTGQAIKTSWRKQPVFV
RNLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITLGVCTHLGCVPLGAAEGENRGDYGGYFCPCHGSHYDTAARI
RKGPAPTNLVVPPYEFTSDTVVTIG
>Mature_184_residues
ASETELNAGIEDGVRRRDFINIAAVSFAGVGAVAAVLPLVNQMNPSADVLALSSTEIDISAIGTGQAIKTSWRKQPVFVR
NLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITLGVCTHLGCVPLGAAEGENRGDYGGYFCPCHGSHYDTAARIR
KGPAPTNLVVPPYEFTSDTVVTIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=165, Percent_Identity=50.9090909090909, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17540418, Length=146, Percent_Identity=50.6849315068493, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6320811, Length=155, Percent_Identity=50.9677419354839, Blast_Score=171, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24580896, Length=147, Percent_Identity=48.9795918367347, Blast_Score=155, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19553; Mature: 19422

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASETELNAGIEDGVRRRDFINIAAVSFAGVGAVAAVLPLVNQMNPSADVLALSSTEIDI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEE
SAIGTGQAIKTSWRKQPVFVRNLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITL
EECCCCHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
GVCTHLGCVPLGAAEGENRGDYGGYFCPCHGSHYDTAARIRKGPAPTNLVVPPYEFTSDT
EHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCE
VVTIG
EEEEC
>Mature Secondary Structure 
ASETELNAGIEDGVRRRDFINIAAVSFAGVGAVAAVLPLVNQMNPSADVLALSSTEIDI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEE
SAIGTGQAIKTSWRKQPVFVRNLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITL
EECCCCHHHHHHHCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEE
GVCTHLGCVPLGAAEGENRGDYGGYFCPCHGSHYDTAARIRKGPAPTNLVVPPYEFTSDT
EHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCE
VVTIG
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]