Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486812

Identifier: 103486812

GI number: 103486812

Start: 1384429

End: 1384893

Strand: Direct

Name: 103486812

Synonym: Sala_1326

Alternate gene names: NA

Gene position: 1384429-1384893 (Clockwise)

Preceding gene: 103486811

Following gene: 103486813

Centisome position: 41.39

GC content: 63.44

Gene sequence:

>465_bases
ATGCGCCCCGCCCTCCTGCTTATGCTCGCAGCCGCGCTTCCCGGTCCGGCCTTTGCCGCCAATCAGGTTGCGCTCGACAA
TCTTGTTTTCGTCGAGCGTGTATCCACCGACGCGGATGGCAAGCAGCACATCCTGCTCGAAGAACCGAAGGTCGTCATTC
CCGGCGACCGGCTCGTCTTCGTGCTCAATTATCGTAATGCCGGCGCACAGCCCGCCGACAAGTTCGTGATTACCAATCCG
ATGCCCGCCGCGGTCCGTTTCGCCGATGCCGGCGACACGCAGCCTTTGGTTTCGGTCGATGGTGGCACACAGTGGGGACG
GCTTGGCGAGCTTTCGGTCGCTATGCCCGACGGCACGCGCCGCGCCGCGCAACCCGCCGACGTCACGCATATCCGCTGGG
CCTTTCAAAAGCCGATTCCGGCGGGCGCCACGGGCAAGCTCATGTTTCGGGGAATCGTCAAATAG

Upstream 100 bases:

>100_bases
ATTTCAACGGCACGCGGATCAATGTCGCGCTCGGCACCGTCGCTGGCGGCCAGACGCGCACCGTCACCTTCCAGACCCTG
ATCGACTGATGGAGATGCCC

Downstream 100 bases:

>100_bases
CGACTGCATAATAACCGCTTAACGATTGCCAGCGGTGGGGAATGGGCAATCGAACCAAACCAAGGAGCTTCAGCTATGAC
CAGCAAGCTGAACACCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRPALLLMLAAALPGPAFAANQVALDNLVFVERVSTDADGKQHILLEEPKVVIPGDRLVFVLNYRNAGAQPADKFVITNP
MPAAVRFADAGDTQPLVSVDGGTQWGRLGELSVAMPDGTRRAAQPADVTHIRWAFQKPIPAGATGKLMFRGIVK

Sequences:

>Translated_154_residues
MRPALLLMLAAALPGPAFAANQVALDNLVFVERVSTDADGKQHILLEEPKVVIPGDRLVFVLNYRNAGAQPADKFVITNP
MPAAVRFADAGDTQPLVSVDGGTQWGRLGELSVAMPDGTRRAAQPADVTHIRWAFQKPIPAGATGKLMFRGIVK
>Mature_154_residues
MRPALLLMLAAALPGPAFAANQVALDNLVFVERVSTDADGKQHILLEEPKVVIPGDRLVFVLNYRNAGAQPADKFVITNP
MPAAVRFADAGDTQPLVSVDGGTQWGRLGELSVAMPDGTRRAAQPADVTHIRWAFQKPIPAGATGKLMFRGIVK

Specific function: Unknown

COG id: COG4719

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16451; Mature: 16451

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPALLLMLAAALPGPAFAANQVALDNLVFVERVSTDADGKQHILLEEPKVVIPGDRLVF
CCHHHHHHHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCEEEEEECCEEEECCCCEEE
VLNYRNAGAQPADKFVITNPMPAAVRFADAGDTQPLVSVDGGTQWGRLGELSVAMPDGTR
EEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
RAAQPADVTHIRWAFQKPIPAGATGKLMFRGIVK
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRPALLLMLAAALPGPAFAANQVALDNLVFVERVSTDADGKQHILLEEPKVVIPGDRLVF
CCHHHHHHHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCEEEEEECCEEEECCCCEEE
VLNYRNAGAQPADKFVITNPMPAAVRFADAGDTQPLVSVDGGTQWGRLGELSVAMPDGTR
EEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
RAAQPADVTHIRWAFQKPIPAGATGKLMFRGIVK
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA