Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486811

Identifier: 103486811

GI number: 103486811

Start: 1383416

End: 1384417

Strand: Direct

Name: 103486811

Synonym: Sala_1325

Alternate gene names: NA

Gene position: 1383416-1384417 (Clockwise)

Preceding gene: 103486809

Following gene: 103486812

Centisome position: 41.36

GC content: 66.37

Gene sequence:

>1002_bases
ATGATGATAGCGCCTGTGGGGGGCGCGAAGCATCGGCTTCTTCCCTCTTGTTCATTCATCGCGCTGCTCGCCGCGCTTGC
GCTGCCGATGCAGGCAAACGCCGCCGGAACGCGCGCCGGGTCGACGATCAGCAATACCGCGTCCGCCAGTTTCGATACCG
GCGGTGGGCCGACGACGATCGACTCGAACCGCGTTGACCTGCTCGTCGACGAACTGCTCGACGTCACCGTCGATTCGGGC
AATCCCGCCGACGTGCCGACCACGCCGGGCGCCACCGGACAGGTGCTGACCTTCTCGGTCACCAACAATGGCAATGGCGT
TGAGGATTTCGCGCTGAGCACGGTCGCGAATGCGGGCGGCGACGATTACGACCCGGCAGTAACGCAGGTCTATCTCGACA
ATGGCGACGGTCTGTTCGATGCCGGAACCGACACGCTCTATATCGCGGGCGTCAACGATCCGACGCTCGATCCCGACGAG
AGCACCACGGTGTTCGTCGTGACGACGACGCCCGGCGCGGTCGTCGACGGCAATCGCGGCATCGTCAGCCTCGCCGCGGC
GGCAAAGACGGGAACCGGCGCGCCCGGCGACAGTTTTGCCGGTCAGGGCGAAGGCGGCGGCGACGCCGTCGTCGGTTCGA
CCGGCGCCGATGGCGAAGATGCCGGCGCCTTCGTCGTTTCGGCCGCGACGGTCACGCTCGTCAAATCGGCCAGCATCACC
AATCCGCTCGGCACCGCCGACCCGATCCCCGGGGCGACGATCACTTATACGATCGTCGCCACCGTTGCGGGCAGCGGTTC
GGTGAACGGGCTCGCAATCACCGACAATATCCCCGCCGACACCAGCTATATCCCCGGCTCGATCACGCTCGGCGGTAGCG
GACTGACCGACGCGGCCGATGCTGATGCGGGCGATTTCAACGGCACGCGGATCAATGTCGCGCTCGGCACCGTCGCTGGC
GGCCAGACGCGCACCGTCACCTTCCAGACCCTGATCGACTGA

Upstream 100 bases:

>100_bases
CTTTTGGAGCAAATCGCGACTTTCCAAAGACTTCTTAACCAGAAATTACCCTTTTTCGGCGATTGACGGCTTCAAGGACC
AACCTTTCGGAGTCAATCTG

Downstream 100 bases:

>100_bases
TGGAGATGCCCATGCGCCCCGCCCTCCTGCTTATGCTCGCAGCCGCGCTTCCCGGTCCGGCCTTTGCCGCCAATCAGGTT
GCGCTCGACAATCTTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MMIAPVGGAKHRLLPSCSFIALLAALALPMQANAAGTRAGSTISNTASASFDTGGGPTTIDSNRVDLLVDELLDVTVDSG
NPADVPTTPGATGQVLTFSVTNNGNGVEDFALSTVANAGGDDYDPAVTQVYLDNGDGLFDAGTDTLYIAGVNDPTLDPDE
STTVFVVTTTPGAVVDGNRGIVSLAAAAKTGTGAPGDSFAGQGEGGGDAVVGSTGADGEDAGAFVVSAATVTLVKSASIT
NPLGTADPIPGATITYTIVATVAGSGSVNGLAITDNIPADTSYIPGSITLGGSGLTDAADADAGDFNGTRINVALGTVAG
GQTRTVTFQTLID

Sequences:

>Translated_333_residues
MMIAPVGGAKHRLLPSCSFIALLAALALPMQANAAGTRAGSTISNTASASFDTGGGPTTIDSNRVDLLVDELLDVTVDSG
NPADVPTTPGATGQVLTFSVTNNGNGVEDFALSTVANAGGDDYDPAVTQVYLDNGDGLFDAGTDTLYIAGVNDPTLDPDE
STTVFVVTTTPGAVVDGNRGIVSLAAAAKTGTGAPGDSFAGQGEGGGDAVVGSTGADGEDAGAFVVSAATVTLVKSASIT
NPLGTADPIPGATITYTIVATVAGSGSVNGLAITDNIPADTSYIPGSITLGGSGLTDAADADAGDFNGTRINVALGTVAG
GQTRTVTFQTLID
>Mature_333_residues
MMIAPVGGAKHRLLPSCSFIALLAALALPMQANAAGTRAGSTISNTASASFDTGGGPTTIDSNRVDLLVDELLDVTVDSG
NPADVPTTPGATGQVLTFSVTNNGNGVEDFALSTVANAGGDDYDPAVTQVYLDNGDGLFDAGTDTLYIAGVNDPTLDPDE
STTVFVVTTTPGAVVDGNRGIVSLAAAAKTGTGAPGDSFAGQGEGGGDAVVGSTGADGEDAGAFVVSAATVTLVKSASIT
NPLGTADPIPGATITYTIVATVAGSGSVNGLAITDNIPADTSYIPGSITLGGSGLTDAADADAGDFNGTRINVALGTVAG
GQTRTVTFQTLID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32534; Mature: 32534

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIAPVGGAKHRLLPSCSFIALLAALALPMQANAAGTRAGSTISNTASASFDTGGGPTTI
CEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
DSNRVDLLVDELLDVTVDSGNPADVPTTPGATGQVLTFSVTNNGNGVEDFALSTVANAGG
CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCC
DDYDPAVTQVYLDNGDGLFDAGTDTLYIAGVNDPTLDPDESTTVFVVTTTPGAVVDGNRG
CCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCC
IVSLAAAAKTGTGAPGDSFAGQGEGGGDAVVGSTGADGEDAGAFVVSAATVTLVKSASIT
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC
NPLGTADPIPGATITYTIVATVAGSGSVNGLAITDNIPADTSYIPGSITLGGSGLTDAAD
CCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCC
ADAGDFNGTRINVALGTVAGGQTRTVTFQTLID
CCCCCCCCCEEEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MMIAPVGGAKHRLLPSCSFIALLAALALPMQANAAGTRAGSTISNTASASFDTGGGPTTI
CEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
DSNRVDLLVDELLDVTVDSGNPADVPTTPGATGQVLTFSVTNNGNGVEDFALSTVANAGG
CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCC
DDYDPAVTQVYLDNGDGLFDAGTDTLYIAGVNDPTLDPDESTTVFVVTTTPGAVVDGNRG
CCCCCCEEEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCC
IVSLAAAAKTGTGAPGDSFAGQGEGGGDAVVGSTGADGEDAGAFVVSAATVTLVKSASIT
EEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC
NPLGTADPIPGATITYTIVATVAGSGSVNGLAITDNIPADTSYIPGSITLGGSGLTDAAD
CCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCC
ADAGDFNGTRINVALGTVAGGQTRTVTFQTLID
CCCCCCCCCEEEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA