| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486776
Identifier: 103486776
GI number: 103486776
Start: 1348456
End: 1348752
Strand: Reverse
Name: 103486776
Synonym: Sala_1290
Alternate gene names: NA
Gene position: 1348752-1348456 (Counterclockwise)
Preceding gene: 103486778
Following gene: 103486775
Centisome position: 40.32
GC content: 68.35
Gene sequence:
>297_bases ATGTCGTTCGACAGCGGCCCCCTCGACCGGTATTTGAGCGCCGCGTTCGGCGATGATCCGGCAATGGCGGCGGAGCTGCG CAAGGCCTTTGCCGACAGCGCGCGCGAGCTTGCCGACCTGCTGCGCCGTGCGCGGTGCGACGCCAATTGGGAGATGGCGG CGTTGCGGCTCAAAAGCCTGTCGGCAACCTTCGGCGTCATCCCCCTCATCGAACTGGCCGAAGCGGCGATGGCGGGCGCG CCGGGTGACCCCGCGGTGCTGCGCGCGATCAATCGGATCATCGACGAGATCGCCTGA
Upstream 100 bases:
>100_bases ACAATCCGACGATTTTCTTTTCCCCCGTCATCGCGCCATCTTAGCATCAAACGCCCGCCATGAAACGGAAACTTAACCCC GCCGATGGCAAAGCTGTGGA
Downstream 100 bases:
>100_bases CCGCCGCTGCGGGTTCAATTCCCGTTCAGCCGGACGCAGCCAGAGAAATATCGATAGCGCCCGTCTTGCCATGGCAACGC GACCGGTTTAGCCGCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSFDSGPLDRYLSAAFGDDPAMAAELRKAFADSARELADLLRRARCDANWEMAALRLKSLSATFGVIPLIELAEAAMAGA PGDPAVLRAINRIIDEIA
Sequences:
>Translated_98_residues MSFDSGPLDRYLSAAFGDDPAMAAELRKAFADSARELADLLRRARCDANWEMAALRLKSLSATFGVIPLIELAEAAMAGA PGDPAVLRAINRIIDEIA >Mature_97_residues SFDSGPLDRYLSAAFGDDPAMAAELRKAFADSARELADLLRRARCDANWEMAALRLKSLSATFGVIPLIELAEAAMAGAP GDPAVLRAINRIIDEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10478; Mature: 10347
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDSGPLDRYLSAAFGDDPAMAAELRKAFADSARELADLLRRARCDANWEMAALRLKSL CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SATFGVIPLIELAEAAMAGAPGDPAVLRAINRIIDEIA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure SFDSGPLDRYLSAAFGDDPAMAAELRKAFADSARELADLLRRARCDANWEMAALRLKSL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SATFGVIPLIELAEAAMAGAPGDPAVLRAINRIIDEIA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA