| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mazG [H]
Identifier: 103486756
GI number: 103486756
Start: 1325959
End: 1326732
Strand: Direct
Name: mazG [H]
Synonym: Sala_1270
Alternate gene names: 103486756
Gene position: 1325959-1326732 (Clockwise)
Preceding gene: 103486755
Following gene: 103486764
Centisome position: 39.64
GC content: 64.99
Gene sequence:
>774_bases ATGACCGAGACCCTGGCCGCAGCCCCCATCGACCGCCTCCTTGCCATCATGCGGCAGCTCCGCGACCCCGACAGCGGCTG CGAATGGGATCTCGCGCAGAGCTTTGCGACGATCGCGCCCTATACGATCGAGGAGGCCTATGAGGTTGCCGATGCCATTG CAGGCGGCGACCCTGCGGCAATCTGCAACGAGCTTGGCGACCTGCTCCTTCAAGTCGTTTTTCATGCGCAGATTGCGGCC GACAGCGGCCTTTTCACTTTTGATGATGTCGCCGATGCGATCAGCGACAAGATGGAACGGCGCCATCCGCATATCTTTGA CGATGCGCCAACCGACGATGCGACTCGGCAATGGGAGGCGATCAAAGCCGAAGAGCGGGCGGCCGACGGGGCGCAGGGCG CGCTCGCGGGGGTTGCCCTTTCGCTTCCCGCGCTGCTGCGCGCGCAGAAGCTTCAGGATCGCGCCGCGCGGGTCGGGTTT GATTGGCCCGACATCGACGGTCCGCGTGAAAAAATTGTCGAGGAGCTGACGGAGGTTGCCGACGCCACCAATGCCGTCGA GCGCCACGAAGAGATCGGCGACCTGCTCTTCGCCGTCGTCAACTATGCCCGCAAGATGGGCGTCGATGCCGAAAGCGCAC TGCGCGACGCCAATCTGAAGTTCGCGCGGCGCTTTGCCGCAATGGAGGCGCGGGCGGGCGGTTCCCTGGCAGGACTGTCG CTCGGCGCGCAGGAGGCGCACTGGAAAGCCGTCAAGGCGACGGAGGGCCGTTAG
Upstream 100 bases:
>100_bases GGCGCTGCTGCCGACATCCAGGTCGAATCGGCTCTGCCGCGTCGTTCCCATGGCCGCCTCTCGCGGGCGCGCCAACCCCG ATTGGAGTGGCGTGACGACT
Downstream 100 bases:
>100_bases CGGGCCACAGCCTTTCAAAGCGGGCGCGATCCGCCGGATCGAGCCGAACGGTCAGCACATGCCCCTCGCCTTCAGCTTCG TCCGCGAGCACTTCACCGCG
Product: MazG family protein
Products: NA
Alternate protein names: NTP-PPase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTETLAAAPIDRLLAIMRQLRDPDSGCEWDLAQSFATIAPYTIEEAYEVADAIAGGDPAAICNELGDLLLQVVFHAQIAA DSGLFTFDDVADAISDKMERRHPHIFDDAPTDDATRQWEAIKAEERAADGAQGALAGVALSLPALLRAQKLQDRAARVGF DWPDIDGPREKIVEELTEVADATNAVERHEEIGDLLFAVVNYARKMGVDAESALRDANLKFARRFAAMEARAGGSLAGLS LGAQEAHWKAVKATEGR
Sequences:
>Translated_257_residues MTETLAAAPIDRLLAIMRQLRDPDSGCEWDLAQSFATIAPYTIEEAYEVADAIAGGDPAAICNELGDLLLQVVFHAQIAA DSGLFTFDDVADAISDKMERRHPHIFDDAPTDDATRQWEAIKAEERAADGAQGALAGVALSLPALLRAQKLQDRAARVGF DWPDIDGPREKIVEELTEVADATNAVERHEEIGDLLFAVVNYARKMGVDAESALRDANLKFARRFAAMEARAGGSLAGLS LGAQEAHWKAVKATEGR >Mature_256_residues TETLAAAPIDRLLAIMRQLRDPDSGCEWDLAQSFATIAPYTIEEAYEVADAIAGGDPAAICNELGDLLLQVVFHAQIAAD SGLFTFDDVADAISDKMERRHPHIFDDAPTDDATRQWEAIKAEERAADGAQGALAGVALSLPALLRAQKLQDRAARVGFD WPDIDGPREKIVEELTEVADATNAVERHEEIGDLLFAVVNYARKMGVDAESALRDANLKFARRFAAMEARAGGSLAGLSL GAQEAHWKAVKATEGR
Specific function: Involved in the regulation of bacterial cell survival under conditions of nutritional stress. Regulates the MazEF toxin- antitoxin (TA) module that mediates programmed cell death (PCD). This is achieved by lowering the cellular concentration of (p)ppGpp p
COG id: COG1694
COG function: function code R; Predicted pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nucleoside triphosphate pyrophosphohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1789144, Length=257, Percent_Identity=51.7509727626459, Blast_Score=246, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004518 - InterPro: IPR011551 [H]
Pfam domain/function: PF03819 MazG [H]
EC number: =3.6.1.8 [H]
Molecular weight: Translated: 27741; Mature: 27610
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETLAAAPIDRLLAIMRQLRDPDSGCEWDLAQSFATIAPYTIEEAYEVADAIAGGDPAA CCCCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH ICNELGDLLLQVVFHAQIAADSGLFTFDDVADAISDKMERRHPHIFDDAPTDDATRQWEA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH IKAEERAADGAQGALAGVALSLPALLRAQKLQDRAARVGFDWPDIDGPREKIVEELTEVA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH DATNAVERHEEIGDLLFAVVNYARKMGVDAESALRDANLKFARRFAAMEARAGGSLAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC LGAQEAHWKAVKATEGR CCCHHHHHHHHHCCCCC >Mature Secondary Structure TETLAAAPIDRLLAIMRQLRDPDSGCEWDLAQSFATIAPYTIEEAYEVADAIAGGDPAA CCCHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH ICNELGDLLLQVVFHAQIAADSGLFTFDDVADAISDKMERRHPHIFDDAPTDDATRQWEA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH IKAEERAADGAQGALAGVALSLPALLRAQKLQDRAARVGFDWPDIDGPREKIVEELTEVA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH DATNAVERHEEIGDLLFAVVNYARKMGVDAESALRDANLKFARRFAAMEARAGGSLAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC LGAQEAHWKAVKATEGR CCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]