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The map label for this gene is ydiO [H]

Identifier: 103486733

GI number: 103486733

Start: 1296672

End: 1297826

Strand: Reverse

Name: ydiO [H]

Synonym: Sala_1246

Alternate gene names: 103486733

Gene position: 1297826-1296672 (Counterclockwise)

Preceding gene: 103486734

Following gene: 103486732

Centisome position: 38.8

GC content: 63.81

Gene sequence:

>1155_bases
ATGGTGGCCGAGTTCGGAAAGGCCGCGCGCAAGGGGCTGGGCGTCGAAGAAGATCTGGCGCTCGGTCGCCGCTATCAAAG
GGCCAAGTTCGACGCGGGCTTTGCAGGTATCAACTGGCCGACCAAATATGGCGGCCAGGGCCTCGGTCATATCGAAAAGA
TCAGCTTCGAGGCCGAGGAGATGAAACACGGCTTCCCCAACGTCTATTTCGGCATTTCGCTGGGGATGCCGGTACCTGTG
CTCATGCAGTTCGGCAGCGACCGCGAGTTCGTGAAAGAGCGCGTGCTCAAGGCGCTCACCGGCGAGGAAATCTGGTGCCA
GCTCTTCTCCGAACCTTCGGGCGGTACGGACCTCGCCGGGCTGCGCACGCGGGCCGAGCCTGACGGCAATGGCTGGAAGA
TCAACGGGCAGAAGGTCTGGACGAGCTGGGCGCAATATAGTGACTATGGCGTCATCGTCGTGCGCACCGACCCGACGGTG
CCCAAGCACAAGGGGCTCACATACTTCTGGGTCGATATGAAGGCGCCGGGCGTCACCGTGCGCCCGATCAAGCTCGCGGG
CGGCGACAGCCATGTCAACGAGGTGTTCTTCGACGATGTGAAGGTCGGCGACGATCATCGCATGTCGCCGGTCGGCGGCG
GCTTTGCGGTCGCGATGGCGACGCTGATGATCGAACGCTATGTCGCGACCGACAGCGCGGGCTTCGGTCCGCACCTCGAC
CTGTTCGTCGATCTGGCGAAAGAGATGAAGCTGAACGGCCGCCCCGCGATCGAGGATGGCCGCATCCGCCAGCAGATCGC
CCGCAACTATGCGATGCGCGCCGGGCTCGACTCCATCAACATGCGCGCGCGACTGATGATGCAGGCGGGCATGACGCCCG
GCCCCGAAGGCTCGCTGGGCAAGCTCGTGTCGGTTCGTTCGCGCCAGAAATTGTCCGAACTCGCGCTCGACCTGCAAGGC
TCCGAAGCCTTCGCGTTCGACGACCACGCCTCGCCCAGGGACGACTGGGCGTCGAGCTGGATCAACGCGCCGACGGGCCG
TATCGCGGGCGGATCGGATGAGACTTTGCTCAACACGATTGCCGAAAAGATCCTCGGACTGCCGCAGGATCACCGCCCCG
ACAAGGGCATTCCGTTCAACCAGATCCCCGCCTGA

Upstream 100 bases:

>100_bases
GCCTCTTTTGGGAAGATGTGCTCGTCGACCAGTTGGCGGGCGAAAACGCATGACCGATCTCGAAACATATCGCGCCAGGG
CGGCGGCCTGGTGCGAATCG

Downstream 100 bases:

>100_bases
AGGAGCCCTCCCCATGAAAATCGATTCCGCGACCGCCGCCGTCGTCACCGGTGGCGCCTCCGGCCTCGGCCGCGCGACCG
CCGAAGCGCTTGCGGCCGCC

Product: acyl-CoA dehydrogenase-like protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MVAEFGKAARKGLGVEEDLALGRRYQRAKFDAGFAGINWPTKYGGQGLGHIEKISFEAEEMKHGFPNVYFGISLGMPVPV
LMQFGSDREFVKERVLKALTGEEIWCQLFSEPSGGTDLAGLRTRAEPDGNGWKINGQKVWTSWAQYSDYGVIVVRTDPTV
PKHKGLTYFWVDMKAPGVTVRPIKLAGGDSHVNEVFFDDVKVGDDHRMSPVGGGFAVAMATLMIERYVATDSAGFGPHLD
LFVDLAKEMKLNGRPAIEDGRIRQQIARNYAMRAGLDSINMRARLMMQAGMTPGPEGSLGKLVSVRSRQKLSELALDLQG
SEAFAFDDHASPRDDWASSWINAPTGRIAGGSDETLLNTIAEKILGLPQDHRPDKGIPFNQIPA

Sequences:

>Translated_384_residues
MVAEFGKAARKGLGVEEDLALGRRYQRAKFDAGFAGINWPTKYGGQGLGHIEKISFEAEEMKHGFPNVYFGISLGMPVPV
LMQFGSDREFVKERVLKALTGEEIWCQLFSEPSGGTDLAGLRTRAEPDGNGWKINGQKVWTSWAQYSDYGVIVVRTDPTV
PKHKGLTYFWVDMKAPGVTVRPIKLAGGDSHVNEVFFDDVKVGDDHRMSPVGGGFAVAMATLMIERYVATDSAGFGPHLD
LFVDLAKEMKLNGRPAIEDGRIRQQIARNYAMRAGLDSINMRARLMMQAGMTPGPEGSLGKLVSVRSRQKLSELALDLQG
SEAFAFDDHASPRDDWASSWINAPTGRIAGGSDETLLNTIAEKILGLPQDHRPDKGIPFNQIPA
>Mature_384_residues
MVAEFGKAARKGLGVEEDLALGRRYQRAKFDAGFAGINWPTKYGGQGLGHIEKISFEAEEMKHGFPNVYFGISLGMPVPV
LMQFGSDREFVKERVLKALTGEEIWCQLFSEPSGGTDLAGLRTRAEPDGNGWKINGQKVWTSWAQYSDYGVIVVRTDPTV
PKHKGLTYFWVDMKAPGVTVRPIKLAGGDSHVNEVFFDDVKVGDDHRMSPVGGGFAVAMATLMIERYVATDSAGFGPHLD
LFVDLAKEMKLNGRPAIEDGRIRQQIARNYAMRAGLDSINMRARLMMQAGMTPGPEGSLGKLVSVRSRQKLSELALDLQG
SEAFAFDDHASPRDDWASSWINAPTGRIAGGSDETLLNTIAEKILGLPQDHRPDKGIPFNQIPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI187960098, Length=343, Percent_Identity=27.9883381924198, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557231, Length=343, Percent_Identity=27.9883381924198, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI226958414, Length=213, Percent_Identity=30.0469483568075, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI226958412, Length=211, Percent_Identity=29.3838862559242, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI4557233, Length=297, Percent_Identity=26.2626262626263, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4501859, Length=355, Percent_Identity=23.943661971831, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI76496475, Length=310, Percent_Identity=26.7741935483871, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4557235, Length=310, Percent_Identity=26.7741935483871, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4501857, Length=209, Percent_Identity=28.7081339712919, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081958, Length=352, Percent_Identity=25.8522727272727, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1786223, Length=365, Percent_Identity=24.6575342465753, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=203, Percent_Identity=29.5566502463054, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17505929, Length=244, Percent_Identity=30.327868852459, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=207, Percent_Identity=28.9855072463768, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=341, Percent_Identity=25.2199413489736, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=266, Percent_Identity=28.9473684210526, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=341, Percent_Identity=24.0469208211144, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=336, Percent_Identity=24.702380952381, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=191, Percent_Identity=29.3193717277487, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=197, Percent_Identity=27.4111675126904, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=233, Percent_Identity=25.3218884120172, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356377, Length=306, Percent_Identity=25.4901960784314, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24660351, Length=238, Percent_Identity=28.1512605042017, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24646207, Length=343, Percent_Identity=24.198250728863, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281363737, Length=317, Percent_Identity=24.6056782334385, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666513, Length=344, Percent_Identity=25, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355753, Length=201, Percent_Identity=28.3582089552239, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 42069; Mature: 42069

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEFGKAARKGLGVEEDLALGRRYQRAKFDAGFAGINWPTKYGGQGLGHIEKISFEAEE
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHCCCHHH
MKHGFPNVYFGISLGMPVPVLMQFGSDREFVKERVLKALTGEEIWCQLFSEPSGGTDLAG
HHCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
LRTRAEPDGNGWKINGQKVWTSWAQYSDYGVIVVRTDPTVPKHKGLTYFWVDMKAPGVTV
CCCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE
RPIKLAGGDSHVNEVFFDDVKVGDDHRMSPVGGGFAVAMATLMIERYVATDSAGFGPHLD
EEEEEECCCCHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
LFVDLAKEMKLNGRPAIEDGRIRQQIARNYAMRAGLDSINMRARLMMQAGMTPGPEGSLG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHH
KLVSVRSRQKLSELALDLQGSEAFAFDDHASPRDDWASSWINAPTGRIAGGSDETLLNTI
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
AEKILGLPQDHRPDKGIPFNQIPA
HHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVAEFGKAARKGLGVEEDLALGRRYQRAKFDAGFAGINWPTKYGGQGLGHIEKISFEAEE
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHCCCHHH
MKHGFPNVYFGISLGMPVPVLMQFGSDREFVKERVLKALTGEEIWCQLFSEPSGGTDLAG
HHCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
LRTRAEPDGNGWKINGQKVWTSWAQYSDYGVIVVRTDPTVPKHKGLTYFWVDMKAPGVTV
CCCCCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE
RPIKLAGGDSHVNEVFFDDVKVGDDHRMSPVGGGFAVAMATLMIERYVATDSAGFGPHLD
EEEEEECCCCHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
LFVDLAKEMKLNGRPAIEDGRIRQQIARNYAMRAGLDSINMRARLMMQAGMTPGPEGSLG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHH
KLVSVRSRQKLSELALDLQGSEAFAFDDHASPRDDWASSWINAPTGRIAGGSDETLLNTI
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
AEKILGLPQDHRPDKGIPFNQIPA
HHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]