| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486698
Identifier: 103486698
GI number: 103486698
Start: 1250855
End: 1251085
Strand: Direct
Name: 103486698
Synonym: Sala_1210
Alternate gene names: NA
Gene position: 1250855-1251085 (Clockwise)
Preceding gene: 103486697
Following gene: 103486699
Centisome position: 37.39
GC content: 62.34
Gene sequence:
>231_bases ATGCGCAGCCGGTTCCTGACCGACGACAGCGGCGTCGGCAATCCGCACGCGCCGCCGGCGATCGACTGTTACCTCGTCAC CCGCCTCGACACGCTGGTCCGCCGGGTGATCGACAGCCAGATCAGCGGTCGCCGAATCGAACCCGACGAAAATGAAATCA TCCGCAGCGTCGGCAATTACGACGCCGGAAAATGTATCCTGCCCGCCGATTTCAAATGGCAGAACGGGTGA
Upstream 100 bases:
>100_bases CGGGCGGTTGTCGCCGCGTTATCCCTTCGTCGCAGTTCAGCCACAGTTCAGCGGTTGACCGTAATGATGATATGACATCA CATGGATGGGGAGGTCTATG
Downstream 100 bases:
>100_bases CGCAAAATCCGGCTTGACGGAATCAAGCTATCCCCGCCACCCTCGCGCGTACATGCGAGAGCCGGTGACGGGGATAGTTT TTTAATGCAATTGGTAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MRSRFLTDDSGVGNPHAPPAIDCYLVTRLDTLVRRVIDSQISGRRIEPDENEIIRSVGNYDAGKCILPADFKWQNG
Sequences:
>Translated_76_residues MRSRFLTDDSGVGNPHAPPAIDCYLVTRLDTLVRRVIDSQISGRRIEPDENEIIRSVGNYDAGKCILPADFKWQNG >Mature_76_residues MRSRFLTDDSGVGNPHAPPAIDCYLVTRLDTLVRRVIDSQISGRRIEPDENEIIRSVGNYDAGKCILPADFKWQNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8531; Mature: 8531
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRFLTDDSGVGNPHAPPAIDCYLVTRLDTLVRRVIDSQISGRRIEPDENEIIRSVGNY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC DAGKCILPADFKWQNG CCCCEECCCCCCCCCC >Mature Secondary Structure MRSRFLTDDSGVGNPHAPPAIDCYLVTRLDTLVRRVIDSQISGRRIEPDENEIIRSVGNY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC DAGKCILPADFKWQNG CCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA