The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yceI [C]

Identifier: 103486692

GI number: 103486692

Start: 1244700

End: 1245965

Strand: Reverse

Name: yceI [C]

Synonym: Sala_1204

Alternate gene names: 103486692

Gene position: 1245965-1244700 (Counterclockwise)

Preceding gene: 103486693

Following gene: 103486689

Centisome position: 37.25

GC content: 68.48

Gene sequence:

>1266_bases
ATGGCCGTTCAACGCTATAGCTATACCGCGATCGCGCTCCACTGGCTGATCGCGCTGCTCCTCGCCTTTCAGGTCGCGCT
CGGCTGGGCGCTCGAAGGCGATAACAGTCCCGAGCTGTTTCAGCGGTTCCAGCTTCACAAATCGGTCGGCATCGCGATCC
TGCTGCTCAGCCTCCTCCGCCTTGCGACCCGTTTCGTCATGCCGCGCCCGCCGGCGTCCGACGGGCCGACATGGACGCGC
GCGCTGGCAGGCATCGTCCACAGCCTTTTCTATGTCGTGATGATCGTCGGCCCGCTCACCGGCTGGCTGCTCGTATCGAC
GGCGAAGATTCAGGTGCCGACCTTGCTGTTCGGTATGGTGCCCTGGCCGCACCTTCCCGTCGGTCGCGGCTGGCATGAGC
CTGCCGAGGTGATCCACGAGACAATGGCGTGGCTGGCGATCGGGCTGTTCCTGCTGCATGTCGCGGGCGCGCTCCGTCAC
CAGTGGTTGCTCGGCAAGCCCGAGCTTCAGCGGATGATCCCGTCGGCGCGCGGCAAAGCCGTGGGGGCCGTCTTGATCGC
ACTGGCGTTCGTCGGCGGCGCCTTCGCCGTGGGTTCAAGCGTCTATCCCGACCGCGACCGGGCCGCGCCCGCCGAACCGG
CCATGTCCAATACAGCACAGACCGCGCCCGTCGCGCCTCCCGCGCCGATCGAGGCCGAAAAGACGGAAGCGGACGAAGCC
CCTGACAGCGATCCCGCTGCCGAGCCCGAAGACACGGCAGAGCCCCTCGCCGACTGGTCGGTGGCGCCGGGCGGGCGCCT
TGGCTTCACCGCGCGCTGGAATGGCGAGGCGGTCGAGGGGCGCTTCGATCGCTGGCGCGCCGACATCCGGTTCAGTCCCG
ACCATCTCACGGGGTCGCGCATCAAGGTGACGGTCGACCTCGCCTCGGCCGACACCGGCGACGGCCAGCGCGACGATTCG
CTGAAGGGCAGCGATTTCTTCGATACCGCCGCACATCCCAGCGCAATCTTCACCGCGCGCGACGTTCGTAAGCTTGGTGG
TGACCGCTATGCGGCGCGCGGCACGCTCGAGCTGCGCGGCGCCGCCAGGCCGGTGACGCTGCGCTTCACGCTGGGGATCG
AGGGCGACCGCGCGCGCGTCAACGGCACGGCGCGGATCGACCGCACGGCGTTCGGGGTCGGTCAGGGCGAATGGGCAGCG
ACCGATGCGATTCCGGCGGAAGTCGATATCGCCTTTGCCTTCACTGCGACGCGGCAGTCAGGCTGA

Upstream 100 bases:

>100_bases
GGTTCGACGATTGATCGTTGGCGGCGATTGATACTTGTGCGAATCGAGTCGTCCGCTAGGCTCCCCTCCGCCCCGCGCGC
TCCCCGACACAAAGGTTTCC

Downstream 100 bases:

>100_bases
CGGGGGCCGCGCAACAATCCGGTCCGCACCCGCCACGCTTCGACAAGAGAAGGGAATTGAGGGGGTGCCGCCATTTGCAG
GCCGCCAGGGCGGAATGTCG

Product: YceI

Products: NA

Alternate protein names: Cytochrome B; Ycei Family Protein; YceI Like Family; YceI Like Family Protein; Cytochrome; YciI Family Periplasmic Protein; YceI-Like Family Protein; YceI/Cytochrome; Phage Head-Tail Adaptor; Signal Peptide Protein; Ycei-Like Protein

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MAVQRYSYTAIALHWLIALLLAFQVALGWALEGDNSPELFQRFQLHKSVGIAILLLSLLRLATRFVMPRPPASDGPTWTR
ALAGIVHSLFYVVMIVGPLTGWLLVSTAKIQVPTLLFGMVPWPHLPVGRGWHEPAEVIHETMAWLAIGLFLLHVAGALRH
QWLLGKPELQRMIPSARGKAVGAVLIALAFVGGAFAVGSSVYPDRDRAAPAEPAMSNTAQTAPVAPPAPIEAEKTEADEA
PDSDPAAEPEDTAEPLADWSVAPGGRLGFTARWNGEAVEGRFDRWRADIRFSPDHLTGSRIKVTVDLASADTGDGQRDDS
LKGSDFFDTAAHPSAIFTARDVRKLGGDRYAARGTLELRGAARPVTLRFTLGIEGDRARVNGTARIDRTAFGVGQGEWAA
TDAIPAEVDIAFAFTATRQSG

Sequences:

>Translated_421_residues
MAVQRYSYTAIALHWLIALLLAFQVALGWALEGDNSPELFQRFQLHKSVGIAILLLSLLRLATRFVMPRPPASDGPTWTR
ALAGIVHSLFYVVMIVGPLTGWLLVSTAKIQVPTLLFGMVPWPHLPVGRGWHEPAEVIHETMAWLAIGLFLLHVAGALRH
QWLLGKPELQRMIPSARGKAVGAVLIALAFVGGAFAVGSSVYPDRDRAAPAEPAMSNTAQTAPVAPPAPIEAEKTEADEA
PDSDPAAEPEDTAEPLADWSVAPGGRLGFTARWNGEAVEGRFDRWRADIRFSPDHLTGSRIKVTVDLASADTGDGQRDDS
LKGSDFFDTAAHPSAIFTARDVRKLGGDRYAARGTLELRGAARPVTLRFTLGIEGDRARVNGTARIDRTAFGVGQGEWAA
TDAIPAEVDIAFAFTATRQSG
>Mature_420_residues
AVQRYSYTAIALHWLIALLLAFQVALGWALEGDNSPELFQRFQLHKSVGIAILLLSLLRLATRFVMPRPPASDGPTWTRA
LAGIVHSLFYVVMIVGPLTGWLLVSTAKIQVPTLLFGMVPWPHLPVGRGWHEPAEVIHETMAWLAIGLFLLHVAGALRHQ
WLLGKPELQRMIPSARGKAVGAVLIALAFVGGAFAVGSSVYPDRDRAAPAEPAMSNTAQTAPVAPPAPIEAEKTEADEAP
DSDPAAEPEDTAEPLADWSVAPGGRLGFTARWNGEAVEGRFDRWRADIRFSPDHLTGSRIKVTVDLASADTGDGQRDDSL
KGSDFFDTAAHPSAIFTARDVRKLGGDRYAARGTLELRGAARPVTLRFTLGIEGDRARVNGTARIDRTAFGVGQGEWAAT
DAIPAEVDIAFAFTATRQSG

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787295, Length=148, Percent_Identity=31.0810810810811, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45298; Mature: 45167

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQRYSYTAIALHWLIALLLAFQVALGWALEGDNSPELFQRFQLHKSVGIAILLLSLLR
CCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LATRFVMPRPPASDGPTWTRALAGIVHSLFYVVMIVGPLTGWLLVSTAKIQVPTLLFGMV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEHHHHHHHCC
PWPHLPVGRGWHEPAEVIHETMAWLAIGLFLLHVAGALRHQWLLGKPELQRMIPSARGKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCHH
VGAVLIALAFVGGAFAVGSSVYPDRDRAAPAEPAMSNTAQTAPVAPPAPIEAEKTEADEA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDSDPAAEPEDTAEPLADWSVAPGGRLGFTARWNGEAVEGRFDRWRADIRFSPDHLTGSR
CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHEECEEECCCCCCCCE
IKVTVDLASADTGDGQRDDSLKGSDFFDTAAHPSAIFTARDVRKLGGDRYAARGTLELRG
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEEECC
AARPVTLRFTLGIEGDRARVNGTARIDRTAFGVGQGEWAATDAIPAEVDIAFAFTATRQS
CCCCEEEEEEEECCCCCEEECCCEEECHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
G
C
>Mature Secondary Structure 
AVQRYSYTAIALHWLIALLLAFQVALGWALEGDNSPELFQRFQLHKSVGIAILLLSLLR
CCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LATRFVMPRPPASDGPTWTRALAGIVHSLFYVVMIVGPLTGWLLVSTAKIQVPTLLFGMV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEHHHHHHHCC
PWPHLPVGRGWHEPAEVIHETMAWLAIGLFLLHVAGALRHQWLLGKPELQRMIPSARGKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHCCHH
VGAVLIALAFVGGAFAVGSSVYPDRDRAAPAEPAMSNTAQTAPVAPPAPIEAEKTEADEA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDSDPAAEPEDTAEPLADWSVAPGGRLGFTARWNGEAVEGRFDRWRADIRFSPDHLTGSR
CCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHEECEEECCCCCCCCE
IKVTVDLASADTGDGQRDDSLKGSDFFDTAAHPSAIFTARDVRKLGGDRYAARGTLELRG
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEEECC
AARPVTLRFTLGIEGDRARVNGTARIDRTAFGVGQGEWAATDAIPAEVDIAFAFTATRQS
CCCCEEEEEEEECCCCCEEECCCEEECHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA