Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486687

Identifier: 103486687

GI number: 103486687

Start: 1240249

End: 1240599

Strand: Reverse

Name: 103486687

Synonym: Sala_1199

Alternate gene names: NA

Gene position: 1240599-1240249 (Counterclockwise)

Preceding gene: 103486688

Following gene: 103486686

Centisome position: 37.09

GC content: 59.26

Gene sequence:

>351_bases
ATGACCGCCTATCTCGCGCCGATCGGCCTTCTGTTCCTGTCCAACATCTTCATGACCTTTGCCTGGTATGGGCAGCTTGG
CGCCGTGTCGCGGCCGATGTGGCTTGCGATAGTGATCGCCTGGGGCATAGCCTTTTTCGAATACTGCCTCGTTATCCCCG
CCAACCGCATCGGCTATGGCGTCTACACGGCGGCCGAACTCAAGACCTTGCAGGAAATCGTCACGCTGGTCATATTCGCC
GGCTTCGCGGTCTTCTGGCTCGGAGAAAGGCTGACCGTGAACCATCTCGTCGGCTTCGGACTGATTGCGGCGGGGGCGTT
TTTCATCTTCAAGGGGCCGATTGCGGCCTGA

Upstream 100 bases:

>100_bases
TCGAACATTCGGCCCATATGCCGATGGTTGAGGAGCCGGGGCGTTTCTTTGCGGCGCTGCTTCGCGACGTTCTTCCCCTG
ACGGACGCGGAAGCGACACC

Downstream 100 bases:

>100_bases
CAGAAAGCCAATAGCGACATGGAAACCCGTGCCGGCGATCCCGGAGCCTTTACCCGCTTCGACCTGACCCGCGTCCCCTC
GCCCGCCTTCGTCGTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTAYLAPIGLLFLSNIFMTFAWYGQLGAVSRPMWLAIVIAWGIAFFEYCLVIPANRIGYGVYTAAELKTLQEIVTLVIFA
GFAVFWLGERLTVNHLVGFGLIAAGAFFIFKGPIAA

Sequences:

>Translated_116_residues
MTAYLAPIGLLFLSNIFMTFAWYGQLGAVSRPMWLAIVIAWGIAFFEYCLVIPANRIGYGVYTAAELKTLQEIVTLVIFA
GFAVFWLGERLTVNHLVGFGLIAAGAFFIFKGPIAA
>Mature_115_residues
TAYLAPIGLLFLSNIFMTFAWYGQLGAVSRPMWLAIVIAWGIAFFEYCLVIPANRIGYGVYTAAELKTLQEIVTLVIFAG
FAVFWLGERLTVNHLVGFGLIAAGAFFIFKGPIAA

Specific function: Unknown

COG id: COG3169

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12715; Mature: 12584

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYLAPIGLLFLSNIFMTFAWYGQLGAVSRPMWLAIVIAWGIAFFEYCLVIPANRIGYG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
VYTAAELKTLQEIVTLVIFAGFAVFWLGERLTVNHLVGFGLIAAGAFFIFKGPIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TAYLAPIGLLFLSNIFMTFAWYGQLGAVSRPMWLAIVIAWGIAFFEYCLVIPANRIGYG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
VYTAAELKTLQEIVTLVIFAGFAVFWLGERLTVNHLVGFGLIAAGAFFIFKGPIAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA