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The map label for this gene is ybaC [H]

Identifier: 103486688

GI number: 103486688

Start: 1240596

End: 1241690

Strand: Reverse

Name: ybaC [H]

Synonym: Sala_1200

Alternate gene names: 103486688

Gene position: 1241690-1240596 (Counterclockwise)

Preceding gene: 103486689

Following gene: 103486687

Centisome position: 37.12

GC content: 63.47

Gene sequence:

>1095_bases
ATGAGATTTTCCATCCTTGTCGCGGCGACGCTCGCCGCCCTCTCCACCCCCGCTGCCGCCCAATCCGAAGACCCTTACGC
CCCCGCGCGCGCGATCGTCGCCGACATCGGCAAGATCGTGACGCCGAACGGCGTTCAGGAAACCTTTGAGGTCACGCTCG
GTGGCGCGCGGCAGGTCGTAAACGTGCGCGGCGCCGACCGGGACAATCCGATCCTGATCTTTGTCCACGGCGGCCCCGGC
GCCGTCGAAATGCCGTTCGCCTGGGCTTTTCAGCGTCCATGGGAAGACGTCTTCACCGTCGTTCATTACGACCAGCGGGG
CGCCGGGCGAAGCTATCCGCTGAACGACCCCGAAGCGTTGGCCCGGACCATGACGCCCGAACGCTATCGCGACGATGCAA
TCGAACTGATCGAGCATCTGCAAAAGCGGTATGGGAAGAAAAAGGTCGTGCTGATGGGGCACAGCTGGGGTTCGATCGTC
GGCCTGTCGGTCGCGCTGAAGCGTCCCGACCTGTTGCACGCCTATGTCGGCGTCGGGCAGGGCATAGATTTCCGCAAAGG
CGAAAAGGCCGGTATGGCGTGGACACGCGCCAAGGCGCTGGCCGACGGGAATAAGGAGGCCGTCGCCGCCATCGAGGCGC
TCGCGCCCTATCCGCAGGGAGAGTTCACCATCGCCAAGGCCGATGGCTGGCGCAAATATGCGATTCCCTACGGATCGCTG
ATGTACAACAAGCCCGACCTGAAACGCTATTTCCAGACTCCGCTGCTTTCGCCCGAATATGGCCCCGACGACATCGGGGC
ATGGGGGAAGGGCAGCGCGTTTTCGGTGGCGACGCTGTGGCCGCGGCTCGCCGACGTCAGCTTCAAGTCGGTACGCAAGA
TGGAGGTACCGATCGTCCTCCTGCTAGGACGGCACGATTATACCGTGCCTTCGCCGGTAGCAGCCGACTGGTTCGCGAAG
GTCGAGGCGCCCTCGAAAAGGCTCGTTTGGCTCGAACATTCGGCCCATATGCCGATGGTTGAGGAGCCGGGGCGTTTCTT
TGCGGCGCTGCTTCGCGACGTTCTTCCCCTGACGGACGCGGAAGCGACACCATGA

Upstream 100 bases:

>100_bases
GAAGGCCGGGATCGCACCCCATGGGTTGGACATCTCGGCGAGATCCCGGCCTTTGCCGGGATGACGACATCTGAAGGCCG
GTGCGTTGAAGGGACGTAGA

Downstream 100 bases:

>100_bases
CCGCCTATCTCGCGCCGATCGGCCTTCTGTTCCTGTCCAACATCTTCATGACCTTTGCCTGGTATGGGCAGCTTGGCGCC
GTGTCGCGGCCGATGTGGCT

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MRFSILVAATLAALSTPAAAQSEDPYAPARAIVADIGKIVTPNGVQETFEVTLGGARQVVNVRGADRDNPILIFVHGGPG
AVEMPFAWAFQRPWEDVFTVVHYDQRGAGRSYPLNDPEALARTMTPERYRDDAIELIEHLQKRYGKKKVVLMGHSWGSIV
GLSVALKRPDLLHAYVGVGQGIDFRKGEKAGMAWTRAKALADGNKEAVAAIEALAPYPQGEFTIAKADGWRKYAIPYGSL
MYNKPDLKRYFQTPLLSPEYGPDDIGAWGKGSAFSVATLWPRLADVSFKSVRKMEVPIVLLLGRHDYTVPSPVAADWFAK
VEAPSKRLVWLEHSAHMPMVEEPGRFFAALLRDVLPLTDAEATP

Sequences:

>Translated_364_residues
MRFSILVAATLAALSTPAAAQSEDPYAPARAIVADIGKIVTPNGVQETFEVTLGGARQVVNVRGADRDNPILIFVHGGPG
AVEMPFAWAFQRPWEDVFTVVHYDQRGAGRSYPLNDPEALARTMTPERYRDDAIELIEHLQKRYGKKKVVLMGHSWGSIV
GLSVALKRPDLLHAYVGVGQGIDFRKGEKAGMAWTRAKALADGNKEAVAAIEALAPYPQGEFTIAKADGWRKYAIPYGSL
MYNKPDLKRYFQTPLLSPEYGPDDIGAWGKGSAFSVATLWPRLADVSFKSVRKMEVPIVLLLGRHDYTVPSPVAADWFAK
VEAPSKRLVWLEHSAHMPMVEEPGRFFAALLRDVLPLTDAEATP
>Mature_364_residues
MRFSILVAATLAALSTPAAAQSEDPYAPARAIVADIGKIVTPNGVQETFEVTLGGARQVVNVRGADRDNPILIFVHGGPG
AVEMPFAWAFQRPWEDVFTVVHYDQRGAGRSYPLNDPEALARTMTPERYRDDAIELIEHLQKRYGKKKVVLMGHSWGSIV
GLSVALKRPDLLHAYVGVGQGIDFRKGEKAGMAWTRAKALADGNKEAVAAIEALAPYPQGEFTIAKADGWRKYAIPYGSL
MYNKPDLKRYFQTPLLSPEYGPDDIGAWGKGSAFSVATLWPRLADVSFKSVRKMEVPIVLLLGRHDYTVPSPVAADWFAK
VEAPSKRLVWLEHSAHMPMVEEPGRFFAALLRDVLPLTDAEATP

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 39992; Mature: 39992

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSILVAATLAALSTPAAAQSEDPYAPARAIVADIGKIVTPNGVQETFEVTLGGARQVV
CCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCEEEE
NVRGADRDNPILIFVHGGPGAVEMPFAWAFQRPWEDVFTVVHYDQRGAGRSYPLNDPEAL
EECCCCCCCCEEEEEECCCCCEECCCHHHHCCCHHHHEEEEEECCCCCCCCCCCCCHHHH
ARTMTPERYRDDAIELIEHLQKRYGKKKVVLMGHSWGSIVGLSVALKRPDLLHAYVGVGQ
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCC
GIDFRKGEKAGMAWTRAKALADGNKEAVAAIEALAPYPQGEFTIAKADGWRKYAIPYGSL
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCHH
MYNKPDLKRYFQTPLLSPEYGPDDIGAWGKGSAFSVATLWPRLADVSFKSVRKMEVPIVL
EECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCEEE
LLGRHDYTVPSPVAADWFAKVEAPSKRLVWLEHSAHMPMVEEPGRFFAALLRDVLPLTDA
EECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
EATP
CCCC
>Mature Secondary Structure
MRFSILVAATLAALSTPAAAQSEDPYAPARAIVADIGKIVTPNGVQETFEVTLGGARQVV
CCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEEECCCEEEE
NVRGADRDNPILIFVHGGPGAVEMPFAWAFQRPWEDVFTVVHYDQRGAGRSYPLNDPEAL
EECCCCCCCCEEEEEECCCCCEECCCHHHHCCCHHHHEEEEEECCCCCCCCCCCCCHHHH
ARTMTPERYRDDAIELIEHLQKRYGKKKVVLMGHSWGSIVGLSVALKRPDLLHAYVGVGQ
HHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCC
GIDFRKGEKAGMAWTRAKALADGNKEAVAAIEALAPYPQGEFTIAKADGWRKYAIPYGSL
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCHH
MYNKPDLKRYFQTPLLSPEYGPDDIGAWGKGSAFSVATLWPRLADVSFKSVRKMEVPIVL
EECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCHHHHHHCCCCEEE
LLGRHDYTVPSPVAADWFAKVEAPSKRLVWLEHSAHMPMVEEPGRFFAALLRDVLPLTDA
EECCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
EATP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]