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The map label for this gene is 103486613

Identifier: 103486613

GI number: 103486613

Start: 1163525

End: 1164568

Strand: Reverse

Name: 103486613

Synonym: Sala_1125

Alternate gene names: NA

Gene position: 1164568-1163525 (Counterclockwise)

Preceding gene: 103486614

Following gene: 103486611

Centisome position: 34.81

GC content: 63.22

Gene sequence:

>1044_bases
ATGATTAGCACCCTCCCCGTCACCGCGGCATTTTCGGGCGCCCAGACCGGACCCTCGCTCCTCGGCATCGACGTCGTCTG
GGCGGGTACGCTGCTCGCCGCGATCGGCGTTTTTGCCGTGCTCGTCGCCATCTACAATGCGCTGACCGTACGCAACCCGA
TGACAAAGCGCGTCAAGGCGCTGAACGAGCGCCGCGAACAGTTGAAGGCCGGCATCACCGCCTCCACCGCCAAGCGTCGC
GCGCGGCTCGTGCGCAAAAACCAGACGGCCGACCGAATGCGCAATTTCCTGGGCCGCTTGCAGGTCTTGCAGGAAGGGCA
GATCAAGGAGGTTCAGCAAAAGCTGGCCCAGGCCGGCATCCGGTCAAAGGATCTGGCGGTCGCGGTCATTTTCGGGCGAA
TGGTGCTGCCGATCCTGTTCGGCGGTCTGGCCCTCTTCCTGATCTATATTGTCGACATGTGGCCGACGCTGACGCCGTTC
AAGCGGTCGGGTTTTACCATGGCCGCGCTGATTCTCGGTTACAAGGCGCCGGACCTGTTCGTCGACAATATGCGCCAGAA
GCGTACCGATGCCATCCGCAAGGGTCTTCCGGACGCGCTCGACCTGCTCGTGATCTGCGCCGAGGCGGGGCTGACGGTCG
ACTCGGCCTTCTCGCGCGTATCGAAGGAACTGGGCCGCGCCTATCCCGAACTCGGCGAGGAGTTTGCGCTTACATCGATC
GAGCTCGGCTTCCTCACCGAGCGCCGACAGGCATTCGAGAACCTTGCCTATCGCGTCAATCTGGAATCGGTGAAGGGCGT
CGTCACGACGATGATCCAGACCGAAAAATATGGCACGCCGCTCGCCAGCGCGCTGCGCGTGCTGTCGGCCGAGTTTCGCA
ATGAGCGCATGATGCGGGCCGAGGAAAAAGCCGCGCGCCTGCCTGCGATCATGACGGTACCGCTGATCCTGTTCATCCTG
CCGGTGCTGTTCATCGTCATCCTTGGACCCGCGGCCTGTTCGCTGAGCGACGCAATGGCTGGCGGCAGCTTCGGCGGCCG
ATAG

Upstream 100 bases:

>100_bases
CGCCTGATCGTCGCCGGGATCGGCGGGCTGATCTGGATGAGCATCGGGGCCGGAATCATGGCCAAGATGGTCAATTTCGA
GATTTGATGGGGCAAAGAAT

Downstream 100 bases:

>100_bases
GCTATCGACCGGTCAGACCGGCAAGGGAGGGCGGCAGCGATTCCGCCCTCCCCTTCCTCTTGTCAGGCGACCGTCTGCTC
AATCGCGCCGAAGATGCTGT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Type II Secretion System F Domain; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MISTLPVTAAFSGAQTGPSLLGIDVVWAGTLLAAIGVFAVLVAIYNALTVRNPMTKRVKALNERREQLKAGITASTAKRR
ARLVRKNQTADRMRNFLGRLQVLQEGQIKEVQQKLAQAGIRSKDLAVAVIFGRMVLPILFGGLALFLIYIVDMWPTLTPF
KRSGFTMAALILGYKAPDLFVDNMRQKRTDAIRKGLPDALDLLVICAEAGLTVDSAFSRVSKELGRAYPELGEEFALTSI
ELGFLTERRQAFENLAYRVNLESVKGVVTTMIQTEKYGTPLASALRVLSAEFRNERMMRAEEKAARLPAIMTVPLILFIL
PVLFIVILGPAACSLSDAMAGGSFGGR

Sequences:

>Translated_347_residues
MISTLPVTAAFSGAQTGPSLLGIDVVWAGTLLAAIGVFAVLVAIYNALTVRNPMTKRVKALNERREQLKAGITASTAKRR
ARLVRKNQTADRMRNFLGRLQVLQEGQIKEVQQKLAQAGIRSKDLAVAVIFGRMVLPILFGGLALFLIYIVDMWPTLTPF
KRSGFTMAALILGYKAPDLFVDNMRQKRTDAIRKGLPDALDLLVICAEAGLTVDSAFSRVSKELGRAYPELGEEFALTSI
ELGFLTERRQAFENLAYRVNLESVKGVVTTMIQTEKYGTPLASALRVLSAEFRNERMMRAEEKAARLPAIMTVPLILFIL
PVLFIVILGPAACSLSDAMAGGSFGGR
>Mature_347_residues
MISTLPVTAAFSGAQTGPSLLGIDVVWAGTLLAAIGVFAVLVAIYNALTVRNPMTKRVKALNERREQLKAGITASTAKRR
ARLVRKNQTADRMRNFLGRLQVLQEGQIKEVQQKLAQAGIRSKDLAVAVIFGRMVLPILFGGLALFLIYIVDMWPTLTPF
KRSGFTMAALILGYKAPDLFVDNMRQKRTDAIRKGLPDALDLLVICAEAGLTVDSAFSRVSKELGRAYPELGEEFALTSI
ELGFLTERRQAFENLAYRVNLESVKGVVTTMIQTEKYGTPLASALRVLSAEFRNERMMRAEEKAARLPAIMTVPLILFIL
PVLFIVILGPAACSLSDAMAGGSFGGR

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37905; Mature: 37905

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTLPVTAAFSGAQTGPSLLGIDVVWAGTLLAAIGVFAVLVAIYNALTVRNPMTKRVKA
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LNERREQLKAGITASTAKRRARLVRKNQTADRMRNFLGRLQVLQEGQIKEVQQKLAQAGI
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
RSKDLAVAVIFGRMVLPILFGGLALFLIYIVDMWPTLTPFKRSGFTMAALILGYKAPDLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCHHH
VDNMRQKRTDAIRKGLPDALDLLVICAEAGLTVDSAFSRVSKELGRAYPELGEEFALTSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGFLTERRQAFENLAYRVNLESVKGVVTTMIQTEKYGTPLASALRVLSAEFRNERMMRA
HHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EEKAARLPAIMTVPLILFILPVLFIVILGPAACSLSDAMAGGSFGGR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISTLPVTAAFSGAQTGPSLLGIDVVWAGTLLAAIGVFAVLVAIYNALTVRNPMTKRVKA
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LNERREQLKAGITASTAKRRARLVRKNQTADRMRNFLGRLQVLQEGQIKEVQQKLAQAGI
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
RSKDLAVAVIFGRMVLPILFGGLALFLIYIVDMWPTLTPFKRSGFTMAALILGYKAPDLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCHHH
VDNMRQKRTDAIRKGLPDALDLLVICAEAGLTVDSAFSRVSKELGRAYPELGEEFALTSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGFLTERRQAFENLAYRVNLESVKGVVTTMIQTEKYGTPLASALRVLSAEFRNERMMRA
HHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
EEKAARLPAIMTVPLILFILPVLFIVILGPAACSLSDAMAGGSFGGR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA