Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is fhuA [C]

Identifier: 103486595

GI number: 103486595

Start: 1137522

End: 1140011

Strand: Reverse

Name: fhuA [C]

Synonym: Sala_1106

Alternate gene names: 103486595

Gene position: 1140011-1137522 (Counterclockwise)

Preceding gene: 103486596

Following gene: 103486587

Centisome position: 34.08

GC content: 66.31

Gene sequence:

>2490_bases
ATGGAAACGCGCCTTGGCTTTGTCGCAGCAGCGATGGTGCTTTGCCTGCCGGTGCCGGCGAAGGCGGCCGAGGAACGCGC
CTTCGACGTGCGCGGCGGCAGCCTGTCGGCCGTGGTGCCGGTCATCAGCCGGCAAGGCGGCGTCAGCATCAGCGTCGCCG
ACGCCCGGTTATGGAAAGCGCGGGTCCGGTCGGTGCGCGGACGGATGCCCGTCGACGAAGCGATCCGCCGCCTGCTTGCG
GGGACCGACGCACATGCCGTTCGGGTCAGTGCGACGAGCTGGCGCATCGAACGGCGCCCGGCGCCGCAGCGTAGCCGCGC
CGCTCCCGCTCCGCGGCAAGTGCCCCAGCCCCGCGCACGTGAACCCGCGAACGAGGTGGTTGCCGCCGCGGCCGATACGA
TCATCGTCACCGCGTCGAAGACCGACCTTCCTTACTCGCATTTCGCCGGCGTCGTCACCCAATTGGATGGCGGCGAACTG
GCGTTTGGCGGGGAACGCGGGATGGACTCGATCCTGTCGCGCACCGCCACGGTCTCCTCGACCCATCTGGGTTCGGGACG
CAACAAGCTGTTCATCCGCGGCATCGCCGATTCGAGTTTCACCGGCCCGACGCAGGCAACGGTCGGCCAGTATCTGGGCG
ACATCAGGCTGAGTTACAACGCCCCGGACCCCGACCTGCGTCTCTATGACATCGACAATGTCGAAATCCTCGAAGGACCG
CAGGGCACGCTTTACGGCGCAGGGTCGCTCGGCGGGATCATTCGCGTCATTCCGAAAGCCCCCGATCCGCGCGGCCCGAC
CGTACAGGCGATCGCGGGCGCCTCGCTGACCCGGCATGGCGACCCCGGCGGCGACATCGCCGGCATTGCGAACCTGCCCG
TCGGCGAGGACGGCCATGCGTTGCGCCTCGTCGGTTACATGATCACCGATGGCGGCTATATCGACAATCCACTCCGCGGA
CAGAATGACGTCAATCGCGTGCATATCCGGGGCGGCCGCGGCACTCTTCGGCTCGATGCGGGAGACGGCTGGACCGTCGA
TATCGGCGGCATCTATCAATCGAACACCTCCGACGATGCCCAATATGCCGACAAGGATGCACCGCCGCTCACCCGCCGCT
CGATGATCGAGCAACCGGCGAAGGCGCGCTACGGTCTCGGCACGCTCGTCGTGATGAAGGATTGGGGCGATTTGCGCTTT
CAATCGTCGAACGCCTTTATCGACCACCGGCTGTTCGAACGCTTCGACGCCAGCCTGCCGGTCGCGGGCGAACTGGACGG
CTCCGGGTCGGGCAACGCCGTCGGGACCGTCGACGTCGAACGCCTCTTCGCGCCGATCGACATCACGCCGTCGCGCGACG
TGCCGCGTCGGCTCGAACAGCATAATGCGACGCGGATGTTCGCCAGCGAAAACCGGCTGTGGCGTCCCTATCACGACGGG
TTTGGCTGGGTCGCCGGGGCAAGCTTCATCACCAATCGCGCGCGACAGGAACGCGAATATGCCTATGGGCCGCTCCATAC
CCCGCTGCCCGGCGTGACCAACCGGATCACCGAGTGGACGGGCTATGCCGAGGCGACCAAGGAACTGCTGACGGGTCTTG
TCGCCTCCGGCGGGCTGCGGCTGTCGCACGTGCGGCTTGGCGGCATGGCCGAGGATGTGCCGTTCGCGCTTGCCCAGGCG
GGGCGAGCGACGACGGCATCGCGGCACGAGACCGACCTCTTGCCCTCCGCCTCGCTGCTTGCGATGCCGCTCGACAATCT
GCGGCTCTACGCCCGCTATCAGGAGGGATTTCGCCCCGGCGGGCTTGCCGTCGACGGCAATTTTGTGCGGCGTTTCAGAA
ACGATCGCGTCCAGACGTGGGAAGCGGGGGTGCGCTTCGGCGACCGAAAGCAGACGCTGCTCGACGCGACCTTATCTTTG
TCGCACAGCCGCTGGCGCAACATCCAGGCCGACTTCATCGACAGCAACGGCTTTCCGACCACCGCCAACATCGGCGACGG
CCGCATCACCAGCCTGTCGGGCGCGCTCGCGATGCGGCCGACCGACGCGCTGACCCTTGAACTGGGCGCGGTCTACAACC
ACAGCCGCGTCGATGATTTGTCGCCGGAGATCCTGCCCGTTTTCGCCGCGACCCCTGCGCGGCTGGGGCGCATTCCCAAT
GTCGCAAGCCATGCCGTGCGCGGATCGGTCAACTATGCGACGATGATCGGCGATGAGGATTTTCGTATTAACGGATGGGC
CAACTATATTGGCCCATCCCGGCTTGGCATCGGCCCGGTGCTGGGCGAAAGCCAGGGCGATTATATCGATACAGGGCTTG
CGATGCGTGTCGGCAACGACCGCCGCGGCCTGTCGCTGACGCTCACCAACCTGTTCGATTCGCGGGGAAATCGCTTCTCG
CTCGGCACACCCTTCGTCGAGGGTAATGCGGGTTTCCTGACCCCGCTCCGCCCCCGCACGCTGCGCATCGCCGTCGACGT
CGCTTATTAG

Upstream 100 bases:

>100_bases
TCATCGACAAGGATCGCGGTCGCACGGTCGCCGACCTCGCCGCCTTGTCGGGAACGCGCGCCGAACGGCGCGGCGAAGGC
TGGATACTGACCCGCTGACG

Downstream 100 bases:

>100_bases
GGCTTCTGACCCTTAGGGTCAGGACCCATTAATTACCCGTTCGAGGTTTGAGGCGATTTTGCTCAGGGCGAGGAGGAAAG
GCGTAGGAATATGAATATAT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Receptor; Outer Membrane nB-Dependent Receptor; NB-Dependent Receptor Domain Protein; NB Dependent Receptor

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKARVRSVRGRMPVDEAIRRLLA
GTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAREPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGEL
AFGGERGMDSILSRTATVSSTHLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHALRLVGYMITDGGYIDNPLRG
QNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDAQYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRF
QSSNAFIDHRLFERFDASLPVAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLRLSHVRLGGMAEDVPFALAQA
GRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPGGLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSL
SHSRWRNIQADFIDSNGFPTTANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGNDRRGLSLTLTNLFDSRGNRFS
LGTPFVEGNAGFLTPLRPRTLRIAVDVAY

Sequences:

>Translated_829_residues
METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKARVRSVRGRMPVDEAIRRLLA
GTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAREPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGEL
AFGGERGMDSILSRTATVSSTHLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHALRLVGYMITDGGYIDNPLRG
QNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDAQYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRF
QSSNAFIDHRLFERFDASLPVAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLRLSHVRLGGMAEDVPFALAQA
GRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPGGLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSL
SHSRWRNIQADFIDSNGFPTTANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGNDRRGLSLTLTNLFDSRGNRFS
LGTPFVEGNAGFLTPLRPRTLRIAVDVAY
>Mature_829_residues
METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKARVRSVRGRMPVDEAIRRLLA
GTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAREPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGEL
AFGGERGMDSILSRTATVSSTHLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHALRLVGYMITDGGYIDNPLRG
QNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDAQYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRF
QSSNAFIDHRLFERFDASLPVAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLRLSHVRLGGMAEDVPFALAQA
GRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPGGLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSL
SHSRWRNIQADFIDSNGFPTTANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGNDRRGLSLTLTNLFDSRGNRFS
LGTPFVEGNAGFLTPLRPRTLRIAVDVAY

Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89362; Mature: 89362

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKA
CCCCHHHHHHHHHHHCCCCCHHHHCCEEEECCCCCEEHHHHHHCCCCCEEEEHHHHHHHH
RVRSVRGRMPVDEAIRRLLAGTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAR
HHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
EPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGELAFGGERGMDSILSRTATVSS
CCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHCCC
THLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEEEECCCEEEEECC
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHA
CCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCE
LRLVGYMITDGGYIDNPLRGQNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDA
EEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCEEECCCCCCH
QYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRFQSSNAFIDHRLFERFDASLP
HHCCCCCCCCHHHHHHCCCHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCC
VAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
CCCCCCCCCCCCEEEEEEHHHEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHCC
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEE
LSHVRLGGMAEDVPFALAQAGRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPG
EEEEEECCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCEEECCCCHHEEEEEHHCCCCCC
GLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSLSHSRWRNIQADFIDSNGFPT
CEEECHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEECCCCCCC
TANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
CCCCCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHCCCCC
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGND
HHHHHHCCCCEEEEEECCCCEEECCCHHCCCCCCCCCCCCCCCCCCCEECCCEEEEECCC
RRGLSLTLTNLFDSRGNRFSLGTPFVEGNAGFLTPLRPRTLRIAVDVAY
CCCEEEEEEHHHHCCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
METRLGFVAAAMVLCLPVPAKAAEERAFDVRGGSLSAVVPVISRQGGVSISVADARLWKA
CCCCHHHHHHHHHHHCCCCCHHHHCCEEEECCCCCEEHHHHHHCCCCCEEEEHHHHHHHH
RVRSVRGRMPVDEAIRRLLAGTDAHAVRVSATSWRIERRPAPQRSRAAPAPRQVPQPRAR
HHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
EPANEVVAAAADTIIVTASKTDLPYSHFAGVVTQLDGGELAFGGERGMDSILSRTATVSS
CCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHCCC
THLGSGRNKLFIRGIADSSFTGPTQATVGQYLGDIRLSYNAPDPDLRLYDIDNVEILEGP
CCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCCEEEEECCCEEEEECC
QGTLYGAGSLGGIIRVIPKAPDPRGPTVQAIAGASLTRHGDPGGDIAGIANLPVGEDGHA
CCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCE
LRLVGYMITDGGYIDNPLRGQNDVNRVHIRGGRGTLRLDAGDGWTVDIGGIYQSNTSDDA
EEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCEEECCCCCCH
QYADKDAPPLTRRSMIEQPAKARYGLGTLVVMKDWGDLRFQSSNAFIDHRLFERFDASLP
HHCCCCCCCCHHHHHHCCCHHHHCCCEEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCC
VAGELDGSGSGNAVGTVDVERLFAPIDITPSRDVPRRLEQHNATRMFASENRLWRPYHDG
CCCCCCCCCCCCEEEEEEHHHEEECCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCHHCC
FGWVAGASFITNRARQEREYAYGPLHTPLPGVTNRITEWTGYAEATKELLTGLVASGGLR
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEE
LSHVRLGGMAEDVPFALAQAGRATTASRHETDLLPSASLLAMPLDNLRLYARYQEGFRPG
EEEEEECCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCCEEECCCCHHEEEEEHHCCCCCC
GLAVDGNFVRRFRNDRVQTWEAGVRFGDRKQTLLDATLSLSHSRWRNIQADFIDSNGFPT
CEEECHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHHCHHHHCCCEEEEECCCCCCC
TANIGDGRITSLSGALAMRPTDALTLELGAVYNHSRVDDLSPEILPVFAATPARLGRIPN
CCCCCCCEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHCCCCC
VASHAVRGSVNYATMIGDEDFRINGWANYIGPSRLGIGPVLGESQGDYIDTGLAMRVGND
HHHHHHCCCCEEEEEECCCCEEECCCHHCCCCCCCCCCCCCCCCCCCEECCCEEEEECCC
RRGLSLTLTNLFDSRGNRFSLGTPFVEGNAGFLTPLRPRTLRIAVDVAY
CCCEEEEEEHHHHCCCCEEECCCCEEECCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA