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The map label for this gene is yngJ [H]

Identifier: 103486593

GI number: 103486593

Start: 1134779

End: 1135972

Strand: Direct

Name: yngJ [H]

Synonym: Sala_1104

Alternate gene names: 103486593

Gene position: 1134779-1135972 (Clockwise)

Preceding gene: 103486592

Following gene: 103486594

Centisome position: 33.92

GC content: 62.23

Gene sequence:

>1194_bases
ATGGACATGGAGTTCAGCCCCGAAGACCTGGCCTTCCAGCAGGAAGTGCGCCAGTTCATCGCCGACAATTATCCCGCCGA
GCTTCGCGGCAAGCAGGACGAGGGCGAAGAGCTGTCCAAGGAGGATTTCCTCGCCTGGCACAAGATTCTGTACAAGAAGG
GCTGGATCGCCCCAGCCTGGCCGGTCGAATATGGCGGCACCGGCTGGACGCCGACGCAGCGCTTCATCTGGTCGGAAGAA
ACCGCGCGCGCCGATTGCATCCGCCTGATGCCTTTTGGTCTGTCGATGGTCGGCCCGGTCATCTACACCTTTGGCACGCC
CGAACAGAAAGCGCATTTCCTGCCGCGCATCCTGTCGGGCGAGGATTGGTGGTGTCAGGGCTATTCGGAACCGGGTTCGG
GGTCCGACCTCGCCTCGCTGCGCACCACCGCGGTGCGCGACGGCGATCATTATATCGTCAACGGGCAGAAGACATGGACG
ACGCTGGCGCAGCACGCCGACTGGGGCTTTTTCCTCGTCCGCACCGACAAGGACGCGAAGCAGCAGGAGGGCATTTCCTT
CCTCCTCATCGACATGAAATCGCCGGGTATCACCGTGCGCCCGATCATCACCCTGGGCGGTGAGCATGAGGTGAACGAAG
TGTGGCTGGAGGATGTGCGCGTCCCCGTCGCAAATCGCGTTTATGAGGAAAACAAGGGCTGGACCTGCGCCAAGTTCCTG
CTCGCGCACGAACGCACGGGTATCGCCGGCGTCGCCGCATCGAAGCGCGGGATCGAGAAGGTGAAGGCGATTGCGCGCAC
CGAACTCGACGGGGACAAGCCGCTGCTCGCCAATCCCTTTTTCAAGCGCAAGGTCGCCGAGCTGGAGGTTGACCTCACCG
CCTTGGAGTTCACCGAGCTGCGCAGCCTGGCCGGTGCCAATGCGGGCAAGGGGCCGGGCCCCGAATCGAGCCTGCTCAAG
ATCAAGGGCAGCGAAATCCAGCAGCGGCTGACCGAGCTGACGCTCGAAGCCGTCGGCCATTATGGCGCGCCCTATTTCCG
CGGCTTCGGCGAAGGCGATAACGAACATCCGATCGGGCCCGACTATGCCCATCGCGCCGCGCCGACCTATTTCAACATGC
GCAAGACGACGATCTATGGCGGGTCGAACGAGATTCAGCGCAACATCATTGCGAAGATGGTTTTGGGTCTTTGA

Upstream 100 bases:

>100_bases
GCGCAATCATCGGCGGCGAAACGTTGCAGGCTGCAACTTGCCGTTTACGTAAAGGTGAGCGCTCGATATAAGGGCGCCAG
TGCCCAATGGGAGAATCGAT

Downstream 100 bases:

>100_bases
GAAATGCGTCGCCCTCGCGAAGGCGGGGGCCGCAACCGGCCTGACTCAGCGCCGCAGTATAAATCTATAGCGGCCCCCGC
CTTCGCGGGGGCGACGGGGA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAWPVEYGGTGWTPTQRFIWSEE
TARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSGEDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWT
TLAQHADWGFFLVRTDKDAKQQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL
LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTELRSLAGANAGKGPGPESSLLK
IKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPIGPDYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL

Sequences:

>Translated_397_residues
MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAWPVEYGGTGWTPTQRFIWSEE
TARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSGEDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWT
TLAQHADWGFFLVRTDKDAKQQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL
LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTELRSLAGANAGKGPGPESSLLK
IKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPIGPDYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL
>Mature_397_residues
MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAWPVEYGGTGWTPTQRFIWSEE
TARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSGEDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWT
TLAQHADWGFFLVRTDKDAKQQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL
LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTELRSLAGANAGKGPGPESSLLK
IKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPIGPDYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=398, Percent_Identity=28.391959798995, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI4501857, Length=400, Percent_Identity=26.5, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4557233, Length=350, Percent_Identity=28.8571428571429, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958412, Length=244, Percent_Identity=29.5081967213115, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI4557231, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI187960098, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI226958414, Length=218, Percent_Identity=31.1926605504587, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI7656849, Length=309, Percent_Identity=28.1553398058252, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI21361497, Length=355, Percent_Identity=28.4507042253521, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI211971008, Length=288, Percent_Identity=27.4305555555556, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI48976061, Length=288, Percent_Identity=27.4305555555556, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI76496475, Length=349, Percent_Identity=28.9398280802292, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4557235, Length=349, Percent_Identity=28.9398280802292, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI38505218, Length=312, Percent_Identity=22.7564102564103, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI87081958, Length=407, Percent_Identity=22.1130221130221, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786223, Length=294, Percent_Identity=21.0884353741497, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=408, Percent_Identity=26.7156862745098, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=407, Percent_Identity=27.5184275184275, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=353, Percent_Identity=28.328611898017, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=352, Percent_Identity=27.8409090909091, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=349, Percent_Identity=25.5014326647564, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=250, Percent_Identity=28.4, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=250, Percent_Identity=30.8, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=353, Percent_Identity=25.7790368271955, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=194, Percent_Identity=34.020618556701, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=223, Percent_Identity=26.9058295964126, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=198, Percent_Identity=31.3131313131313, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=260, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=260, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17533517, Length=245, Percent_Identity=25.7142857142857, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356377, Length=349, Percent_Identity=28.080229226361, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24666513, Length=363, Percent_Identity=25.8953168044077, Blast_Score=95, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24646207, Length=341, Percent_Identity=27.8592375366569, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI21355753, Length=393, Percent_Identity=25.1908396946565, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24660351, Length=300, Percent_Identity=26.3333333333333, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI281363737, Length=306, Percent_Identity=25.8169934640523, Blast_Score=89, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44411; Mature: 44411

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAW
CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PVEYGGTGWTPTQRFIWSEETARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSG
CCCCCCCCCCCCHHEEECCCHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHCC
EDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWTTLAQHADWGFFLVRTDKDAK
CCCEECCCCCCCCCCHHHHHHHHHEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCHH
QQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTEL
HHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHH
RSLAGANAGKGPGPESSLLKIKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPIGP
HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
DYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL
CHHHHCCCCEECCEEEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMEFSPEDLAFQQEVRQFIADNYPAELRGKQDEGEELSKEDFLAWHKILYKKGWIAPAW
CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PVEYGGTGWTPTQRFIWSEETARADCIRLMPFGLSMVGPVIYTFGTPEQKAHFLPRILSG
CCCCCCCCCCCCHHEEECCCHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHHHHCC
EDWWCQGYSEPGSGSDLASLRTTAVRDGDHYIVNGQKTWTTLAQHADWGFFLVRTDKDAK
CCCEECCCCCCCCCCHHHHHHHHHEECCCEEEECCCHHHHHHHHCCCCCEEEEECCCCHH
QQEGISFLLIDMKSPGITVRPIITLGGEHEVNEVWLEDVRVPVANRVYEENKGWTCAKFL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHH
LAHERTGIAGVAASKRGIEKVKAIARTELDGDKPLLANPFFKRKVAELEVDLTALEFTEL
HHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEHHHHHHHHH
RSLAGANAGKGPGPESSLLKIKGSEIQQRLTELTLEAVGHYGAPYFRGFGEGDNEHPIGP
HHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC
DYAHRAAPTYFNMRKTTIYGGSNEIQRNIIAKMVLGL
CHHHHCCCCEECCEEEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]