Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 103486594

GI number: 103486594

Start: 1136079

End: 1137218

Strand: Direct

Name: yngJ [H]

Synonym: Sala_1105

Alternate gene names: 103486594

Gene position: 1136079-1137218 (Clockwise)

Preceding gene: 103486593

Following gene: 103486599

Centisome position: 33.96

GC content: 63.33

Gene sequence:

>1140_bases
ATGGATTTCACCTACACCGAAACGCAGGACATGATCCGCGACACGCTGGCACGCTTTCTCGCGGACACCTGCGACTTCGA
GACGCGCCAGAAGTTCATCAACTCGGACAGCGGCCGTGACCCCGCAATCTGGACAGCGCTGGCGCAGGAACTCGGTATGC
TCGGCGCGGCCTTCGCCGAAGAGCATGGCGGTCTCGGCGGCGGCGCCCTGGAAAATGCGATCGTCATGGAGGAACTGGGC
AAGGTCATCGGGATCGAGCCCTATCTGCCGACCGTCGTCATTGCGGGCGGCGCGCTGAAGGCCGTCGGCGGCGCACAGGC
CGATGCGATGATCCCCGAAATCATCGCCGGCAATATGATCGTCGCCTTTGCCTATGCCGAACCGCAGGGGCGGTATGACC
TTGCCAATCTGAAAACGAGCGCGAAGAAGGATGGGGCGGGCTTTGTGCTGAACGGCCACAAAAGCGTCGTCTATGCGGCG
CCCTGGGCGACGCATCTGCTTGTCACCGCGCGCAGCGGTGGCGGCCAGCGCGACAAGGACGGCATTTCGCTGTTCCTGAT
CGACGCCAAGCTGCCGGGTATCGTCCGCCGCGACTATCCGACGGTCGACGGCAGCCGCGCGTCGGAAATCTATTTCGAAA
ATGTCGCGATTCCTGGTGATGCGCTGCTCGGCGGCGAGGGCGCCGCGCTGCCGCTGATCGAACGGATCGTCGACGAAGCG
ACGGTGGCGACCTGCGCGGAGGCGACAGGCGTGATGCAGAAACTGCACGAAGGCACGCTCGAATATACTCAGCAGCGCAA
GCAGTTCGGCGTGCCTATCGCCAAGTTCCAGGTGCTCCAGCATCGCATGGTCGACATGTTCATGGAGGTCGAACAGGCGC
GCTCGATGACGATCATGGCGACGCTCAAGCTGGGCCTGCCTGCGAACGAACGCATGGCGGCGGTGTCGGCGGCAAAGAAC
AAGGTCGCGCGCGGCGCCAGGTTCGTCGGCCAGAACGCGATCCAGACCCACGGCGGCATCGGCATCACGCAGGAACTGGC
GATCGGCCATTATTTCAAGCGCGCGACGATGATCGAGGGCCAGTTCGGCAGCGCCGATTATCATATGGATCGTTACGAGC
GGCTGACACTGGCCGAATGA

Upstream 100 bases:

>100_bases
CGTCGCCCTCGCGAAGGCGGGGGCCGCAACCGGCCTGACTCAGCGCCGCAGTATAAATCTATAGCGGCCCCCGCCTTCGC
GGGGGCGACGGGGATGTAAA

Downstream 100 bases:

>100_bases
CTTTGCGCCGTCATCGCGCTCTAAGGGTCAGGACCCATTAATTACCCGTTCGAGGCGTCGAAATGGCGAAGATATCGGGC
CTTGGCGGGTGCAGCGGGTA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MDFTYTETQDMIRDTLARFLADTCDFETRQKFINSDSGRDPAIWTALAQELGMLGAAFAEEHGGLGGGALENAIVMEELG
KVIGIEPYLPTVVIAGGALKAVGGAQADAMIPEIIAGNMIVAFAYAEPQGRYDLANLKTSAKKDGAGFVLNGHKSVVYAA
PWATHLLVTARSGGGQRDKDGISLFLIDAKLPGIVRRDYPTVDGSRASEIYFENVAIPGDALLGGEGAALPLIERIVDEA
TVATCAEATGVMQKLHEGTLEYTQQRKQFGVPIAKFQVLQHRMVDMFMEVEQARSMTIMATLKLGLPANERMAAVSAAKN
KVARGARFVGQNAIQTHGGIGITQELAIGHYFKRATMIEGQFGSADYHMDRYERLTLAE

Sequences:

>Translated_379_residues
MDFTYTETQDMIRDTLARFLADTCDFETRQKFINSDSGRDPAIWTALAQELGMLGAAFAEEHGGLGGGALENAIVMEELG
KVIGIEPYLPTVVIAGGALKAVGGAQADAMIPEIIAGNMIVAFAYAEPQGRYDLANLKTSAKKDGAGFVLNGHKSVVYAA
PWATHLLVTARSGGGQRDKDGISLFLIDAKLPGIVRRDYPTVDGSRASEIYFENVAIPGDALLGGEGAALPLIERIVDEA
TVATCAEATGVMQKLHEGTLEYTQQRKQFGVPIAKFQVLQHRMVDMFMEVEQARSMTIMATLKLGLPANERMAAVSAAKN
KVARGARFVGQNAIQTHGGIGITQELAIGHYFKRATMIEGQFGSADYHMDRYERLTLAE
>Mature_379_residues
MDFTYTETQDMIRDTLARFLADTCDFETRQKFINSDSGRDPAIWTALAQELGMLGAAFAEEHGGLGGGALENAIVMEELG
KVIGIEPYLPTVVIAGGALKAVGGAQADAMIPEIIAGNMIVAFAYAEPQGRYDLANLKTSAKKDGAGFVLNGHKSVVYAA
PWATHLLVTARSGGGQRDKDGISLFLIDAKLPGIVRRDYPTVDGSRASEIYFENVAIPGDALLGGEGAALPLIERIVDEA
TVATCAEATGVMQKLHEGTLEYTQQRKQFGVPIAKFQVLQHRMVDMFMEVEQARSMTIMATLKLGLPANERMAAVSAAKN
KVARGARFVGQNAIQTHGGIGITQELAIGHYFKRATMIEGQFGSADYHMDRYERLTLAE

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=374, Percent_Identity=28.6096256684492, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI226958412, Length=370, Percent_Identity=25.9459459459459, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI226958414, Length=349, Percent_Identity=26.647564469914, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4501857, Length=350, Percent_Identity=26, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI4501859, Length=382, Percent_Identity=27.4869109947644, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI21361497, Length=314, Percent_Identity=27.0700636942675, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI187960098, Length=407, Percent_Identity=24.8157248157248, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI4557231, Length=407, Percent_Identity=24.8157248157248, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI7656849, Length=311, Percent_Identity=25.4019292604502, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI4557235, Length=322, Percent_Identity=24.5341614906832, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI76496475, Length=322, Percent_Identity=24.5341614906832, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4503943, Length=282, Percent_Identity=25.886524822695, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7669494, Length=272, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI87081958, Length=362, Percent_Identity=24.8618784530387, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786223, Length=359, Percent_Identity=25.0696378830084, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=339, Percent_Identity=27.7286135693215, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=385, Percent_Identity=26.7532467532467, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=334, Percent_Identity=26.6467065868263, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=382, Percent_Identity=25.9162303664921, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=26.4305177111717, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=359, Percent_Identity=26.4623955431755, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=366, Percent_Identity=26.5027322404372, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=272, Percent_Identity=27.5735294117647, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=312, Percent_Identity=26.6025641025641, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=27.5423728813559, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=365, Percent_Identity=24.6575342465753, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=311, Percent_Identity=21.2218649517685, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=249, Percent_Identity=26.9076305220884, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=361, Percent_Identity=22.9916897506925, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534353, Length=344, Percent_Identity=24.4186046511628, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666513, Length=367, Percent_Identity=28.8828337874659, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI21355753, Length=332, Percent_Identity=28.3132530120482, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21356377, Length=336, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24646207, Length=380, Percent_Identity=27.8947368421053, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=26.4397905759162, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281363737, Length=356, Percent_Identity=25.2808988764045, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19920834, Length=324, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40804; Mature: 40804

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFTYTETQDMIRDTLARFLADTCDFETRQKFINSDSGRDPAIWTALAQELGMLGAAFAE
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
EHGGLGGGALENAIVMEELGKVIGIEPYLPTVVIAGGALKAVGGAQADAMIPEIIAGNMI
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCEE
VAFAYAEPQGRYDLANLKTSAKKDGAGFVLNGHKSVVYAAPWATHLLVTARSGGGQRDKD
EEEEEECCCCCEEHHHHHHCCCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCC
GISLFLIDAKLPGIVRRDYPTVDGSRASEIYFENVAIPGDALLGGEGAALPLIERIVDEA
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHH
TVATCAEATGVMQKLHEGTLEYTQQRKQFGVPIAKFQVLQHRMVDMFMEVEQARSMTIMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
TLKLGLPANERMAAVSAAKNKVARGARFVGQNAIQTHGGIGITQELAIGHYFKRATMIEG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHEEECC
QFGSADYHMDRYERLTLAE
CCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MDFTYTETQDMIRDTLARFLADTCDFETRQKFINSDSGRDPAIWTALAQELGMLGAAFAE
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
EHGGLGGGALENAIVMEELGKVIGIEPYLPTVVIAGGALKAVGGAQADAMIPEIIAGNMI
HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCEE
VAFAYAEPQGRYDLANLKTSAKKDGAGFVLNGHKSVVYAAPWATHLLVTARSGGGQRDKD
EEEEEECCCCCEEHHHHHHCCCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCC
GISLFLIDAKLPGIVRRDYPTVDGSRASEIYFENVAIPGDALLGGEGAALPLIERIVDEA
CEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHH
TVATCAEATGVMQKLHEGTLEYTQQRKQFGVPIAKFQVLQHRMVDMFMEVEQARSMTIMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
TLKLGLPANERMAAVSAAKNKVARGARFVGQNAIQTHGGIGITQELAIGHYFKRATMIEG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHEEECC
QFGSADYHMDRYERLTLAE
CCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]