Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486548

Identifier: 103486548

GI number: 103486548

Start: 1091838

End: 1092275

Strand: Direct

Name: 103486548

Synonym: Sala_1059

Alternate gene names: NA

Gene position: 1091838-1092275 (Clockwise)

Preceding gene: 103486545

Following gene: 103486549

Centisome position: 32.64

GC content: 68.49

Gene sequence:

>438_bases
ATGCTCTTTGGTCCGCGTCCTTCCTGCATCAAGCGGCTGCTGGTCATCGAGGATGACCCGCTGACGGCGTTCGACAATGA
GCATACGCTGAAGCACGCGGGCTATGACGTCGTCGCGACGGTCGATTCGGGCGAGGCGGCGGTGCGTTTTATCGCGGCGG
AACAGATCGATGCGCTGGTGCTCGACCTCGGCCTCGCTGGCGATATGACCGGGCGCGACGTCGCGCGGCTGGCGCGCGAC
CGCGGCATCGCCGTGCTGCTGGTCACCGGTCGATGCCCCGAGGACGCAAGCGACATCGCCATGGCCTGCCTCGACAAGCC
GCACAGCCCGTCGGCGCTGGTCGCCGCGCTGAAGGCGCTCGAAACGATGATCTGCAAGAATCGGGCGCCGCGCAAGGTCG
CGGGCCTGACGACCTGGTGGCGCCCCGCCGCGGCCTGA

Upstream 100 bases:

>100_bases
CACGCTCATAGCCGGAAAAGTGTCGCTTCGTCGATGGCAAGCAGAAGCGATATTGCACGACGCGGCGGAGCGAGCCATGG
CGCATCGAAAGGGAGATTGC

Downstream 100 bases:

>100_bases
GCACGGCAGACCGGTGGGCGGGTCAATTACCCGCTTCCAATTTGGCAGGGAGGCTTTAGGCCCGTGACCTGGGTGCTGCG
CCGGTCCTCGGCCGCGCCGG

Product: response regulator receiver protein

Products: NA

Alternate protein names: Response Regulator Receiver Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD
RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA

Sequences:

>Translated_145_residues
MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD
RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA
>Mature_145_residues
MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD
RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA

Specific function: Unknown

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15505; Mature: 15505

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALV
CCCCCCHHHHHEEHEECCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH
LDLGLAGDMTGRDVARLARDRGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKAL
HHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
ETMICKNRAPRKVAGLTTWWRPAAA
HHHHHCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALV
CCCCCCHHHHHEEHEECCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH
LDLGLAGDMTGRDVARLARDRGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKAL
HHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
ETMICKNRAPRKVAGLTTWWRPAAA
HHHHHCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA