Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486523

Identifier: 103486523

GI number: 103486523

Start: 1069018

End: 1069827

Strand: Direct

Name: 103486523

Synonym: Sala_1034

Alternate gene names: NA

Gene position: 1069018-1069827 (Clockwise)

Preceding gene: 103486522

Following gene: 103486524

Centisome position: 31.96

GC content: 66.05

Gene sequence:

>810_bases
ATGAGCGAGATAGCGGGACTTTTGGCGGTCAATTTCACGGGGCTGCTGGCGGTGATCCTTCTCCTCTGGGCATTTGCGGC
GACGATCCGCGACGTGTCGTTCATCGACGCCTTCTGGGCGTTCGGGATGGTGCTGCTCGCATGGGGGAGCGCCGCGCAGG
CGGAGATCGTTGGCGCCCATGCAAAGCTGCTGCTCGGTCTCACGTCGCTGTGGGGGCTGCGGCTCGCGATCCATCTGGCG
CTGCGCTGGGTGCGCGAGGGCGAAGACCCGCGCTACACCCGGATTTTGGCAAAAACGATGGAGACGCGCGGCTGGAGCTG
GGCAAAGGCGGCGCTGCTCACCGTGTTCCTGACGCAGGCGCCGCTGCTGTTCGTCACCTGCCTGCCCGCACAGATCGGCA
TCTGGGCGAGCGCGGGGGAGGGCGTCGGCATCATCGGCTGGGTCGGCGCGGCGGCGGCGCTGACGGGCATCGCGTTCGAG
AGCATCGGCGACGCGCAGCTCCATGCCTTTCGCCGTAATCCCGCGAACAAGGGGCGGGTGCTCGACACGGGGCTGTGGCG
CTATACGCGGCATCCCAATTATTTCGGAGACGCGCTGAGCTGGTGGGGCATCTGGATCGTCGTACTCGACATCGGCTGGC
CGCCGGCGCTGGCGAGCCTGATTGGTCCGGTCTTTCTGACCTTCACGCTCACCAAATGGTCGGGCAAGGCGCTGCTCGAA
AAGGGGCTGCACAAGACGCGGCCCGACTATGCCGCCTATGTTGAACGCACGTCGGGGTTCGTGCCATGGCCGCCAAAGAC
GAAGGTCTAG

Upstream 100 bases:

>100_bases
TGTTCGAGGTCTATAAAAGCTGTATCCCCAAATATCCCGACCGGGCGGTGCGCTCGATCGACGATATTGTCGGGGGCGAC
ACGGACGAAGAGAGGCCGAT

Downstream 100 bases:

>100_bases
GCGGCGCGGTCGCCGCGGCCGACGCGAAAGCACTGGGCGACGCGCCGCGCATTCGCGCGATCCTGATCGAAGCGGCGCGC
GCGGAGCGCAGCATCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSEIAGLLAVNFTGLLAVILLLWAFAATIRDVSFIDAFWAFGMVLLAWGSAAQAEIVGAHAKLLLGLTSLWGLRLAIHLA
LRWVREGEDPRYTRILAKTMETRGWSWAKAALLTVFLTQAPLLFVTCLPAQIGIWASAGEGVGIIGWVGAAAALTGIAFE
SIGDAQLHAFRRNPANKGRVLDTGLWRYTRHPNYFGDALSWWGIWIVVLDIGWPPALASLIGPVFLTFTLTKWSGKALLE
KGLHKTRPDYAAYVERTSGFVPWPPKTKV

Sequences:

>Translated_269_residues
MSEIAGLLAVNFTGLLAVILLLWAFAATIRDVSFIDAFWAFGMVLLAWGSAAQAEIVGAHAKLLLGLTSLWGLRLAIHLA
LRWVREGEDPRYTRILAKTMETRGWSWAKAALLTVFLTQAPLLFVTCLPAQIGIWASAGEGVGIIGWVGAAAALTGIAFE
SIGDAQLHAFRRNPANKGRVLDTGLWRYTRHPNYFGDALSWWGIWIVVLDIGWPPALASLIGPVFLTFTLTKWSGKALLE
KGLHKTRPDYAAYVERTSGFVPWPPKTKV
>Mature_268_residues
SEIAGLLAVNFTGLLAVILLLWAFAATIRDVSFIDAFWAFGMVLLAWGSAAQAEIVGAHAKLLLGLTSLWGLRLAIHLAL
RWVREGEDPRYTRILAKTMETRGWSWAKAALLTVFLTQAPLLFVTCLPAQIGIWASAGEGVGIIGWVGAAAALTGIAFES
IGDAQLHAFRRNPANKGRVLDTGLWRYTRHPNYFGDALSWWGIWIVVLDIGWPPALASLIGPVFLTFTLTKWSGKALLEK
GLHKTRPDYAAYVERTSGFVPWPPKTKV

Specific function: Unknown

COG id: COG3752

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI281365853, Length=211, Percent_Identity=28.9099526066351, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI28574404, Length=211, Percent_Identity=28.9099526066351, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI21355723, Length=211, Percent_Identity=28.9099526066351, Blast_Score=97, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29466; Mature: 29335

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50244 S5A_REDUCTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIAGLLAVNFTGLLAVILLLWAFAATIRDVSFIDAFWAFGMVLLAWGSAAQAEIVGAH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKLLLGLTSLWGLRLAIHLALRWVREGEDPRYTRILAKTMETRGWSWAKAALLTVFLTQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PLLFVTCLPAQIGIWASAGEGVGIIGWVGAAAALTGIAFESIGDAQLHAFRRNPANKGRV
HHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCE
LDTGLWRYTRHPNYFGDALSWWGIWIVVLDIGWPPALASLIGPVFLTFTLTKWSGKALLE
EECHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHEECCCCCHHHHH
KGLHKTRPDYAAYVERTSGFVPWPPKTKV
HCHHHCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SEIAGLLAVNFTGLLAVILLLWAFAATIRDVSFIDAFWAFGMVLLAWGSAAQAEIVGAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKLLLGLTSLWGLRLAIHLALRWVREGEDPRYTRILAKTMETRGWSWAKAALLTVFLTQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PLLFVTCLPAQIGIWASAGEGVGIIGWVGAAAALTGIAFESIGDAQLHAFRRNPANKGRV
HHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCE
LDTGLWRYTRHPNYFGDALSWWGIWIVVLDIGWPPALASLIGPVFLTFTLTKWSGKALLE
EECHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHEECCCCCHHHHH
KGLHKTRPDYAAYVERTSGFVPWPPKTKV
HCHHHCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA