| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486522
Identifier: 103486522
GI number: 103486522
Start: 1068389
End: 1069021
Strand: Direct
Name: 103486522
Synonym: Sala_1033
Alternate gene names: NA
Gene position: 1068389-1069021 (Clockwise)
Preceding gene: 103486521
Following gene: 103486523
Centisome position: 31.94
GC content: 64.77
Gene sequence:
>633_bases GTGACGAGGATCGACGACAATCCGCCGGGGGTGGTGGCGCGCGCGGTGCGCCGCCTGTTGCTGCTGCTCTATCGGATGCG CGGGTGGAAGGCGGTGGGCGTGGTGCCCGAACCGCGGCGCTTTATCATCATTGCGGCGCCGCATACGAGCAATTGGGATT TCGTCAACTTCCTGGGGCTCACCGCCGACCTTAAGCTGCGGCCCTATTTCATGGCGAAGCTGTCGTTGTTCCGTTGGCCG ATCGGCGGCTTTATCCGCCAGATGGGCGGGGTGCCGGTCGATCGGCGCGGCGGCGGCGGCGACGTCGTGCAGATGATTGG CGAGTTCGCCCGCCGCGAGGAGTTCATGCTGACCGTCGCGCCCGAAGGTACGCGCGGCAAGGCGGCGAAGTGGCGCACCG GATTTTACCAGATTGCGCTCGGCGCCAAGGTCCCGCTGGTCGTCGGGCTGATGGATTATGGCACCAAGACCGGCGGGCTG GGGCCGCTGATCTGGCCGACGGGCGATTTTCGCGCCGACATGCAAAAGGTGTTCGAGGTCTATAAAAGCTGTATCCCCAA ATATCCCGACCGGGCGGTGCGCTCGATCGACGATATTGTCGGGGGCGACACGGACGAAGAGAGGCCGATATGA
Upstream 100 bases:
>100_bases TTTTGTGATCGAACGGGCCTTCGTGGGCTAAGCGGCCTGGCTCCCCCCTTGCGCGGGGCGCGGCTTTCGCGCAATCCGAC GTCGGGAGAGAGGAGCCGGC
Downstream 100 bases:
>100_bases GCGAGATAGCGGGACTTTTGGCGGTCAATTTCACGGGGCTGCTGGCGGTGATCCTTCTCCTCTGGGCATTTGCGGCGACG ATCCGCGACGTGTCGTTCAT
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Acyltransferase; Acyltransferase Family Protein; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Domain Protein; Pseudouridine Synthase RluD; Acyltransferase Protein; Acetyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; PlsC Phosphate Acyltransferases
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTRIDDNPPGVVARAVRRLLLLLYRMRGWKAVGVVPEPRRFIIIAAPHTSNWDFVNFLGLTADLKLRPYFMAKLSLFRWP IGGFIRQMGGVPVDRRGGGGDVVQMIGEFARREEFMLTVAPEGTRGKAAKWRTGFYQIALGAKVPLVVGLMDYGTKTGGL GPLIWPTGDFRADMQKVFEVYKSCIPKYPDRAVRSIDDIVGGDTDEERPI
Sequences:
>Translated_210_residues MTRIDDNPPGVVARAVRRLLLLLYRMRGWKAVGVVPEPRRFIIIAAPHTSNWDFVNFLGLTADLKLRPYFMAKLSLFRWP IGGFIRQMGGVPVDRRGGGGDVVQMIGEFARREEFMLTVAPEGTRGKAAKWRTGFYQIALGAKVPLVVGLMDYGTKTGGL GPLIWPTGDFRADMQKVFEVYKSCIPKYPDRAVRSIDDIVGGDTDEERPI >Mature_209_residues TRIDDNPPGVVARAVRRLLLLLYRMRGWKAVGVVPEPRRFIIIAAPHTSNWDFVNFLGLTADLKLRPYFMAKLSLFRWPI GGFIRQMGGVPVDRRGGGGDVVQMIGEFARREEFMLTVAPEGTRGKAAKWRTGFYQIALGAKVPLVVGLMDYGTKTGGLG PLIWPTGDFRADMQKVFEVYKSCIPKYPDRAVRSIDDIVGGDTDEERPI
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23485; Mature: 23354
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIDDNPPGVVARAVRRLLLLLYRMRGWKAVGVVPEPRRFIIIAAPHTSNWDFVNFLGL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCHHEEECC TADLKLRPYFMAKLSLFRWPIGGFIRQMGGVPVDRRGGGGDVVQMIGEFARREEFMLTVA EECCEECHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC PEGTRGKAAKWRTGFYQIALGAKVPLVVGLMDYGTKTGGLGPLIWPTGDFRADMQKVFEV CCCCCCCCCEECCCEEEEEECCCCCCEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHH YKSCIPKYPDRAVRSIDDIVGGDTDEERPI HHHHCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRIDDNPPGVVARAVRRLLLLLYRMRGWKAVGVVPEPRRFIIIAAPHTSNWDFVNFLGL CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCHHEEECC TADLKLRPYFMAKLSLFRWPIGGFIRQMGGVPVDRRGGGGDVVQMIGEFARREEFMLTVA EECCEECHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC PEGTRGKAAKWRTGFYQIALGAKVPLVVGLMDYGTKTGGLGPLIWPTGDFRADMQKVFEV CCCCCCCCCEECCCEEEEEECCCCCCEEEHHHCCCCCCCCCCEECCCCCHHHHHHHHHHH YKSCIPKYPDRAVRSIDDIVGGDTDEERPI HHHHCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA