Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486485

Identifier: 103486485

GI number: 103486485

Start: 1019934

End: 1020185

Strand: Reverse

Name: 103486485

Synonym: Sala_0996

Alternate gene names: NA

Gene position: 1020185-1019934 (Counterclockwise)

Preceding gene: 103486486

Following gene: 103486482

Centisome position: 30.5

GC content: 66.27

Gene sequence:

>252_bases
TTGACCCACCGTGATTGCCCCCTGAAGTTCGTCGGCAAGAAGCGTCTCGCAGGACGGGCTGGTTGCCCGGTCCAGAGACG
CGCCGCTGTCCGGCGGGCTTCAGGGGGCAACCCCTCCGGGGCGGGTCGATTCTGGCCGATTGCCACGTTGCTCGTCGGGC
GCGATGTCCCGCATCGCACCGCTCCTCGCGCCTCGCACTCGGCCAAAATCGCCTCCGTCACGGTGGATCAATATCATGTC
ATCGCGCTCTAG

Upstream 100 bases:

>100_bases
GGGCAGGTCCCGTCGACGACCTCGCCCCAGGCGGTAAAGGCGGTATCGGCGCGGATGGTCGCGGCCCAGAGCCCTGACCC
TAGAACGCGATGACCTGATA

Downstream 100 bases:

>100_bases
GTCGCGAACAATTGACCGAGATCGGCAAAGGCCTTGAACTCGAGCGCATTGCCCGACGGATCGTGGAAAAACATCGTCGA
TTGTTCGCCTGCTTCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MTHRDCPLKFVGKKRLAGRAGCPVQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRTAPRASHSAKIASVTVDQYHV
IAL

Sequences:

>Translated_83_residues
MTHRDCPLKFVGKKRLAGRAGCPVQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRTAPRASHSAKIASVTVDQYHV
IAL
>Mature_82_residues
THRDCPLKFVGKKRLAGRAGCPVQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRTAPRASHSAKIASVTVDQYHVI
AL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8925; Mature: 8793

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRDCPLKFVGKKRLAGRAGCPVQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRT
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
APRASHSAKIASVTVDQYHVIAL
CCCCCCCCEEEEEECCCEEEEEC
>Mature Secondary Structure 
THRDCPLKFVGKKRLAGRAGCPVQRRAAVRRASGGNPSGAGRFWPIATLLVGRDVPHRT
CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
APRASHSAKIASVTVDQYHVIAL
CCCCCCCCEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA