Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486484

Identifier: 103486484

GI number: 103486484

Start: 1019446

End: 1019937

Strand: Direct

Name: 103486484

Synonym: Sala_0995

Alternate gene names: NA

Gene position: 1019446-1019937 (Clockwise)

Preceding gene: 103486483

Following gene: 103486489

Centisome position: 30.48

GC content: 63.62

Gene sequence:

>492_bases
TTGCCCCACGCGACCGCTGGCCATTGGGGTAGCGGCGAACCGCACAATCATTACAGGAGCGCCGCGATGACCGGACTTCC
GCCCTTTCACATCGCTTTTCCCGTGCATGACCTCGACGCTGCGCGCGCTTTCTATGGTGGCATACTCGGCTGCCCCGAAG
GACGCAGCGACGCCGACTGGATCGACTTCGACCTTTATGGCCACCAGATCGTCGCGCACCGTGTCGACACAAGGCCCGAC
GCCATAGCGGGCCACAATCCGGTCGATGGCCATGCGGTTCCCGTCCCGCACTTCGGCGTGGTGCTGCCGCCTGCGGAATG
GCGCGCGCTTGCCGACCGACTGCGGAACGCCGGGGTGGCCTTTGTGATCGAACCCCATACGCGCTTCGCCGGCGAAGCAG
GCGAACAATCGACGATGTTTTTCCACGATCCGTCGGGCAATGCGCTCGAGTTCAAGGCCTTTGCCGATCTCGGTCAATTG
TTCGCGACCTAG

Upstream 100 bases:

>100_bases
GCGGCGATCATGGCCGCGCTCGCGATCTGGGGCAGCATCGAGGTGTTCCGACAGGCGCAGAACGACCTTGCCGCCGCGGC
GACGTGATGCGGAGCGCGCC

Downstream 100 bases:

>100_bases
AGCGCGATGACATGATATTGATCCACCGTGACGGAGGCGATTTTGGCCGAGTGCGAGGCGCGAGGAGCGGTGCGATGCGG
GACATCGCGCCCGACGAGCA

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Extradiol Dioxygenase; Lactoylglutathione Lyase Protein

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPHATAGHWGSGEPHNHYRSAAMTGLPPFHIAFPVHDLDAARAFYGGILGCPEGRSDADWIDFDLYGHQIVAHRVDTRPD
AIAGHNPVDGHAVPVPHFGVVLPPAEWRALADRLRNAGVAFVIEPHTRFAGEAGEQSTMFFHDPSGNALEFKAFADLGQL
FAT

Sequences:

>Translated_163_residues
MPHATAGHWGSGEPHNHYRSAAMTGLPPFHIAFPVHDLDAARAFYGGILGCPEGRSDADWIDFDLYGHQIVAHRVDTRPD
AIAGHNPVDGHAVPVPHFGVVLPPAEWRALADRLRNAGVAFVIEPHTRFAGEAGEQSTMFFHDPSGNALEFKAFADLGQL
FAT
>Mature_162_residues
PHATAGHWGSGEPHNHYRSAAMTGLPPFHIAFPVHDLDAARAFYGGILGCPEGRSDADWIDFDLYGHQIVAHRVDTRPDA
IAGHNPVDGHAVPVPHFGVVLPPAEWRALADRLRNAGVAFVIEPHTRFAGEAGEQSTMFFHDPSGNALEFKAFADLGQLF
AT

Specific function: Unknown

COG id: COG3565

COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17651; Mature: 17520

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHATAGHWGSGEPHNHYRSAAMTGLPPFHIAFPVHDLDAARAFYGGILGCPEGRSDADW
CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEECCCCCCCCCE
IDFDLYGHQIVAHRVDTRPDAIAGHNPVDGHAVPVPHFGVVLPPAEWRALADRLRNAGVA
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHCCCEE
FVIEPHTRFAGEAGEQSTMFFHDPSGNALEFKAFADLGQLFAT
EEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCC
>Mature Secondary Structure 
PHATAGHWGSGEPHNHYRSAAMTGLPPFHIAFPVHDLDAARAFYGGILGCPEGRSDADW
CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEECCCCCCCCCE
IDFDLYGHQIVAHRVDTRPDAIAGHNPVDGHAVPVPHFGVVLPPAEWRALADRLRNAGVA
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHCCCEE
FVIEPHTRFAGEAGEQSTMFFHDPSGNALEFKAFADLGQLFAT
EEECCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA