Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is ygcG [H]

Identifier: 103486479

GI number: 103486479

Start: 1015790

End: 1016635

Strand: Reverse

Name: ygcG [H]

Synonym: Sala_0990

Alternate gene names: 103486479

Gene position: 1016635-1015790 (Counterclockwise)

Preceding gene: 103486480

Following gene: 103486478

Centisome position: 30.39

GC content: 70.57

Gene sequence:

>846_bases
GTGGGCGCCCCCGCCCTGATCCGTTCGCTGGCGGCGGCGATCCTTTCGGGGCTGCTGCTGCTTGCCGCTCCGGTAGCCGC
GCAGAGCTTCCCCAAGCTCGCGGGCAATCCCGTCGTCGACCAGGCGGACATCATCCCCGCCGCCGAGGAAGCGGCGCTCA
ACACGCAGCTGCTCGACCTCGAAAAACGCACCGGACACCAGCTTGTCGTCGCGACGGTCAGCGACCTTGAGGGCCGCGAT
GTCGCCGATTATGGCTATCGCCTCGGCCGCGAATGGGGGATCGGCGATGCCGAACGCGACGATGGCGTCGTGTTCCTGAT
CGCGCCGAACGAGCGGCGAATGCACATTGCGGTGGGGCTGGGGCTCGAACCTGTTCTCACCGATGCGCTGTCGGGGCGGA
TCATCCGCGATATCATCACCCCGCGCTTCAGGGACGGCGACTATCCCGGCGGCATCCGGGCCGGGGTGAACGCGATCGCC
GAGCAGATCGAACTGCCGCCGGAGGAGGCCGCCGCGCGCGCCAAGGCGGCGGCGGCGCAGGAGCGCGACCGCGCCGACGA
CGGCAGTTTCGGCGGGCTTTTCTTCCTCGGTTTCATCATCCTCATCTTCTTCATCATCCCCTGGTTCGCGAGCCGCGGGC
GCGGCAGGAAACGTCGCCGACGCCGCGACAGCCCGTGGGGCGCGGCGCCGATCATCATCTGGGGTGACGATGACGATTGG
GGCGGCTGGGGCGGTGGCGGCGGATCGTCGTGGGGCGGTGGCGGCGGTTTCGGCGGTGGCGGCTTCGGCGGCTTTTCGGG
CGGCGGCGGCAGCTTCGGCGGCGGCGGCGCGTCGGGCGGCTGGTAG

Upstream 100 bases:

>100_bases
ATCGGCGCCAAAATCGTCCATGGCGCACAGCCGATGACGCCCTATCGCGCGGTGACGCCGAACGCCAATCAGGCGCCGAA
GGTCGATTTCGGGCAGTAAG

Downstream 100 bases:

>100_bases
GAGCACGGGACATGCCACGCAAGGTCAACCATGTGAGCGCCGAGGACCATCGCATCGTCACCGACGCGGTCGCGGCGGCC
GAGCGCCACACCGACGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGAPALIRSLAAAILSGLLLLAAPVAAQSFPKLAGNPVVDQADIIPAAEEAALNTQLLDLEKRTGHQLVVATVSDLEGRD
VADYGYRLGREWGIGDAERDDGVVFLIAPNERRMHIAVGLGLEPVLTDALSGRIIRDIITPRFRDGDYPGGIRAGVNAIA
EQIELPPEEAAARAKAAAAQERDRADDGSFGGLFFLGFIILIFFIIPWFASRGRGRKRRRRRDSPWGAAPIIIWGDDDDW
GGWGGGGGSSWGGGGGFGGGGFGGFSGGGGSFGGGGASGGW

Sequences:

>Translated_281_residues
MGAPALIRSLAAAILSGLLLLAAPVAAQSFPKLAGNPVVDQADIIPAAEEAALNTQLLDLEKRTGHQLVVATVSDLEGRD
VADYGYRLGREWGIGDAERDDGVVFLIAPNERRMHIAVGLGLEPVLTDALSGRIIRDIITPRFRDGDYPGGIRAGVNAIA
EQIELPPEEAAARAKAAAAQERDRADDGSFGGLFFLGFIILIFFIIPWFASRGRGRKRRRRRDSPWGAAPIIIWGDDDDW
GGWGGGGGSSWGGGGGFGGGGFGGFSGGGGSFGGGGASGGW
>Mature_280_residues
GAPALIRSLAAAILSGLLLLAAPVAAQSFPKLAGNPVVDQADIIPAAEEAALNTQLLDLEKRTGHQLVVATVSDLEGRDV
ADYGYRLGREWGIGDAERDDGVVFLIAPNERRMHIAVGLGLEPVLTDALSGRIIRDIITPRFRDGDYPGGIRAGVNAIAE
QIELPPEEAAARAKAAAAQERDRADDGSFGGLFFLGFIILIFFIIPWFASRGRGRKRRRRRDSPWGAAPIIIWGDDDDWG
GWGGGGGSSWGGGGGFGGGGFGGFSGGGGSFGGGGASGGW

Specific function: Unknown

COG id: COG1512

COG function: function code R; Beta-propeller domains of methanol dehydrogenase type

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0603 family [H]

Homologues:

Organism=Escherichia coli, GI87082161, Length=146, Percent_Identity=31.5068493150685, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007621 [H]

Pfam domain/function: PF04536 DUF477 [H]

EC number: NA

Molecular weight: Translated: 29222; Mature: 29091

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPALIRSLAAAILSGLLLLAAPVAAQSFPKLAGNPVVDQADIIPAAEEAALNTQLLDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHH
EKRTGHQLVVATVSDLEGRDVADYGYRLGREWGIGDAERDDGVVFLIAPNERRMHIAVGL
HHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECC
GLEPVLTDALSGRIIRDIITPRFRDGDYPGGIRAGVNAIAEQIELPPEEAAARAKAAAAQ
CCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ERDRADDGSFGGLFFLGFIILIFFIIPWFASRGRGRKRRRRRDSPWGAAPIIIWGDDDDW
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCC
GGWGGGGGSSWGGGGGFGGGGFGGFSGGGGSFGGGGASGGW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GAPALIRSLAAAILSGLLLLAAPVAAQSFPKLAGNPVVDQADIIPAAEEAALNTQLLDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHH
EKRTGHQLVVATVSDLEGRDVADYGYRLGREWGIGDAERDDGVVFLIAPNERRMHIAVGL
HHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECC
GLEPVLTDALSGRIIRDIITPRFRDGDYPGGIRAGVNAIAEQIELPPEEAAARAKAAAAQ
CCHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ERDRADDGSFGGLFFLGFIILIFFIIPWFASRGRGRKRRRRRDSPWGAAPIIIWGDDDDW
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCCCC
GGWGGGGGSSWGGGGGFGGGGFGGFSGGGGSFGGGGASGGW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]