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The map label for this gene is lemA [H]

Identifier: 103486480

GI number: 103486480

Start: 1016637

End: 1017239

Strand: Reverse

Name: lemA [H]

Synonym: Sala_0991

Alternate gene names: 103486480

Gene position: 1017239-1016637 (Counterclockwise)

Preceding gene: 103486482

Following gene: 103486479

Centisome position: 30.41

GC content: 64.51

Gene sequence:

>603_bases
ATGACCATGACCTATCGCAACGCCCGCTGGTTGATCCTGCCTGTCGCCGCGATGAGCCTGTCCGCATGCGGCATCAACAG
CGTGCCGACCAAGGAAGAGGCCGCCAAGGCCAAATGGGCGAATGTCGAGGCCGCCTATCAGCGGCGCGCCGACCTGATCC
CCAACCTCGTCGAAACCGCCAAGGGGGCGGCGAACATCGAACAATCGACGCTCGAAGGCGTGATCCAGGCGCGCGCGTCG
GCGACGCAGGTCAAGCTCAGCACCGACGACCTCGACGATCCCGCCAAGGTGCAGGCGTTCCAGCAGGCGCAGGGCAATGT
GTCGAGCGCGCTCGGCCGCCTGCTCGTCACCGTCGAAGCCTATCCCGACCTCAAGAGCCAGGCGCGCTTCGCCGACCTGA
TGACCCAGCTCGAGGGCACCGAAAACCGCATCAACGTGGCGGTGCAGGACTATAACGCCGCGGTGCAGGACTATAATACG
ACGATCCGCACCTTCCCCGACATCATCGGCGCCAAAATCGTCCATGGCGCACAGCCGATGACGCCCTATCGCGCGGTGAC
GCCGAACGCCAATCAGGCGCCGAAGGTCGATTTCGGGCAGTAA

Upstream 100 bases:

>100_bases
ATCCGGTCCTGTCCGCAAAGGGTGCCGTGGCGATTGCACAAAGGCAAGCGGCTTCCTATTATGTGTATTGTTGCGGCAAA
ACGCCGCCGGAGGGAGCCTG

Downstream 100 bases:

>100_bases
GGTGGGCGCCCCCGCCCTGATCCGTTCGCTGGCGGCGGCGATCCTTTCGGGGCTGCTGCTGCTTGCCGCTCCGGTAGCCG
CGCAGAGCTTCCCCAAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTMTYRNARWLILPVAAMSLSACGINSVPTKEEAAKAKWANVEAAYQRRADLIPNLVETAKGAANIEQSTLEGVIQARAS
ATQVKLSTDDLDDPAKVQAFQQAQGNVSSALGRLLVTVEAYPDLKSQARFADLMTQLEGTENRINVAVQDYNAAVQDYNT
TIRTFPDIIGAKIVHGAQPMTPYRAVTPNANQAPKVDFGQ

Sequences:

>Translated_200_residues
MTMTYRNARWLILPVAAMSLSACGINSVPTKEEAAKAKWANVEAAYQRRADLIPNLVETAKGAANIEQSTLEGVIQARAS
ATQVKLSTDDLDDPAKVQAFQQAQGNVSSALGRLLVTVEAYPDLKSQARFADLMTQLEGTENRINVAVQDYNAAVQDYNT
TIRTFPDIIGAKIVHGAQPMTPYRAVTPNANQAPKVDFGQ
>Mature_199_residues
TMTYRNARWLILPVAAMSLSACGINSVPTKEEAAKAKWANVEAAYQRRADLIPNLVETAKGAANIEQSTLEGVIQARASA
TQVKLSTDDLDDPAKVQAFQQAQGNVSSALGRLLVTVEAYPDLKSQARFADLMTQLEGTENRINVAVQDYNAAVQDYNTT
IRTFPDIIGAKIVHGAQPMTPYRAVTPNANQAPKVDFGQ

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21651; Mature: 21519

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTYRNARWLILPVAAMSLSACGINSVPTKEEAAKAKWANVEAAYQRRADLIPNLVETA
CCCEECCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KGAANIEQSTLEGVIQARASATQVKLSTDDLDDPAKVQAFQQAQGNVSSALGRLLVTVEA
CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEC
YPDLKSQARFADLMTQLEGTENRINVAVQDYNAAVQDYNTTIRTFPDIIGAKIVHGAQPM
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
TPYRAVTPNANQAPKVDFGQ
CCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TMTYRNARWLILPVAAMSLSACGINSVPTKEEAAKAKWANVEAAYQRRADLIPNLVETA
CCEECCCCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KGAANIEQSTLEGVIQARASATQVKLSTDDLDDPAKVQAFQQAQGNVSSALGRLLVTVEA
CCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEC
YPDLKSQARFADLMTQLEGTENRINVAVQDYNAAVQDYNTTIRTFPDIIGAKIVHGAQPM
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
TPYRAVTPNANQAPKVDFGQ
CCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]