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The map label for this gene is yffH [C]

Identifier: 103486477

GI number: 103486477

Start: 1014542

End: 1015090

Strand: Reverse

Name: yffH [C]

Synonym: Sala_0988

Alternate gene names: 103486477

Gene position: 1015090-1014542 (Counterclockwise)

Preceding gene: 103486478

Following gene: 103486471

Centisome position: 30.34

GC content: 68.31

Gene sequence:

>549_bases
ATGACCCGCCCTGCTCCCGACTCGCCCATCGAGACGCGCTGGGAAGGCCGCTTCGTCACGGTCAAGCAGCAGGGAAACTG
GGAATATGTCGCGCGCTCGCGCGGCATCCACGCTGCGGTGATCCTGGCGATCGACGAGGATGCGCGCGGTCGCCACGCCA
TCCTTGTCGAGCAATATCGCGTGCCCTTGAAACGCCAATGCCTCGAACTGCCCGCGGGGCTGGTCGGCGACGACAGCGCG
GGCGAAGCCGCCGAGGTCGCCGCGGCGCGCGAGCTGGAGGAGGAAACGGGTTATCGCGCCGCGACCTGGCGCACCGTCGG
CGAATTCTACAGCTCGCCGGGCATGGTCAGCGAAAGTTTCACCCTGCTCGTTGCGACCGGGTTGACCAAGGTTGGCGCAG
GCGGCGGCGTCGGTGGCGAGGACATCGTCGTCCACCGCGTCCCGCTGAACGGGATCGAGGATTTCGTTGCGGCGAAGCGC
GCCGAAGGCTGCGGCATCGACGTGCGCGTGGCGATGCTGCTGGCGGGTGGGCTGCTGGCCGACACCTAA

Upstream 100 bases:

>100_bases
GCGGAAGCGGTGCGACAGGTCGGGGCGGTGCTTGCGACGCATTTCCCGAAGAGCGACGGCAATCCCAACGAGCTGTGCGA
CCGGCTGATCGAGATTTGAC

Downstream 100 bases:

>100_bases
ATCCTTCGTGTCGAGCGAAGTCGAGACACCCATCGGCGTGGAGCAGAGTCGAGGGGCATCTCGACTTCGCTCGATGCGAA
CGGGACGTAAGGTCAGCGCG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NTP Pyrophosphohydrolase; Nudix Hydrolase Family Protein

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MTRPAPDSPIETRWEGRFVTVKQQGNWEYVARSRGIHAAVILAIDEDARGRHAILVEQYRVPLKRQCLELPAGLVGDDSA
GEAAEVAAARELEEETGYRAATWRTVGEFYSSPGMVSESFTLLVATGLTKVGAGGGVGGEDIVVHRVPLNGIEDFVAAKR
AEGCGIDVRVAMLLAGGLLADT

Sequences:

>Translated_182_residues
MTRPAPDSPIETRWEGRFVTVKQQGNWEYVARSRGIHAAVILAIDEDARGRHAILVEQYRVPLKRQCLELPAGLVGDDSA
GEAAEVAAARELEEETGYRAATWRTVGEFYSSPGMVSESFTLLVATGLTKVGAGGGVGGEDIVVHRVPLNGIEDFVAAKR
AEGCGIDVRVAMLLAGGLLADT
>Mature_181_residues
TRPAPDSPIETRWEGRFVTVKQQGNWEYVARSRGIHAAVILAIDEDARGRHAILVEQYRVPLKRQCLELPAGLVGDDSAG
EAAEVAAARELEEETGYRAATWRTVGEFYSSPGMVSESFTLLVATGLTKVGAGGGVGGEDIVVHRVPLNGIEDFVAAKRA
EGCGIDVRVAMLLAGGLLADT

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17564994, Length=123, Percent_Identity=39.0243902439024, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19404; Mature: 19273

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPAPDSPIETRWEGRFVTVKQQGNWEYVARSRGIHAAVILAIDEDARGRHAILVEQYR
CCCCCCCCCCCCEECCEEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEHHHC
VPLKRQCLELPAGLVGDDSAGEAAEVAAARELEEETGYRAATWRTVGEFYSSPGMVSESF
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCE
TLLVATGLTKVGAGGGVGGEDIVVHRVPLNGIEDFVAAKRAEGCGIDVRVAMLLAGGLLA
EEEEEECCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHC
DT
CC
>Mature Secondary Structure 
TRPAPDSPIETRWEGRFVTVKQQGNWEYVARSRGIHAAVILAIDEDARGRHAILVEQYR
CCCCCCCCCCCEECCEEEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEHHHC
VPLKRQCLELPAGLVGDDSAGEAAEVAAARELEEETGYRAATWRTVGEFYSSPGMVSESF
CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCE
TLLVATGLTKVGAGGGVGGEDIVVHRVPLNGIEDFVAAKRAEGCGIDVRVAMLLAGGLLA
EEEEEECCHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCHHC
DT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA