Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yqeY [H]

Identifier: 103486471

GI number: 103486471

Start: 1007587

End: 1008039

Strand: Reverse

Name: yqeY [H]

Synonym: Sala_0982

Alternate gene names: 103486471

Gene position: 1008039-1007587 (Counterclockwise)

Preceding gene: 103486477

Following gene: 103486470

Centisome position: 30.13

GC content: 63.36

Gene sequence:

>453_bases
ATGATTCGCGATGACATCAAGGCTGCGCAGGTTGCCGCGATGAAGAGCGGCGACAAGGCGCGCCTGGGCACGATCCGGCT
GATGCTGGCGAAGATCAAGGACAAGGACATCGAACTCAGAACCGGCACCGCGCCGGACGACGACGATGCGCTCGTCACCG
ACGTCCTGCAGAAAATGGTCAAGCAGCGCCGCGAATCGATCGCCATGTATGAACAGGGCGGACGGCAGGATCTCGCCGAG
ATCGAAGCGGCCGAGGTCGCGGTGATCGAGGCTTTCCTGCCCGCACAGCTGAGCGATGATGAAGCGATGGCCGCGATCAA
GGCGATTGTCGTGGAGCTGGGCGCCGAGAGCCTGAAGGATATGGGCAAGGTGATGGCCGCGGTGAAGGACCGGCTGGGCA
GCCAGCTCGACATGAGCAAGGCGAGCGGGTGGGTGAAGGCGGCTTTGGGCTGA

Upstream 100 bases:

>100_bases
CGACCAATTAGGCGCCAAAAAAGTGATTCACAAGCTATCGGATTTGGAATCTTCCCGCTAGAGAGGGCCTTTCCGAAATT
TGAGAGCCATGGGGACACGC

Downstream 100 bases:

>100_bases
CCGCCAGCCAAGCGCCATCCTCTTTTTCTGTTCGCATCGAGCGAAGTCGGGACACCCATCGGCATGGAACGAGGTCGAGG
GGCATCTCGACTTCGCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIRDDIKAAQVAAMKSGDKARLGTIRLMLAKIKDKDIELRTGTAPDDDDALVTDVLQKMVKQRRESIAMYEQGGRQDLAE
IEAAEVAVIEAFLPAQLSDDEAMAAIKAIVVELGAESLKDMGKVMAAVKDRLGSQLDMSKASGWVKAALG

Sequences:

>Translated_150_residues
MIRDDIKAAQVAAMKSGDKARLGTIRLMLAKIKDKDIELRTGTAPDDDDALVTDVLQKMVKQRRESIAMYEQGGRQDLAE
IEAAEVAVIEAFLPAQLSDDEAMAAIKAIVVELGAESLKDMGKVMAAVKDRLGSQLDMSKASGWVKAALG
>Mature_150_residues
MIRDDIKAAQVAAMKSGDKARLGTIRLMLAKIKDKDIELRTGTAPDDDDALVTDVLQKMVKQRRESIAMYEQGGRQDLAE
IEAAEVAVIEAFLPAQLSDDEAMAAIKAIVVELGAESLKDMGKVMAAVKDRLGSQLDMSKASGWVKAALG

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 16131; Mature: 16131

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDDIKAAQVAAMKSGDKARLGTIRLMLAKIKDKDIELRTGTAPDDDDALVTDVLQKMV
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
KQRRESIAMYEQGGRQDLAEIEAAEVAVIEAFLPAQLSDDEAMAAIKAIVVELGAESLKD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHH
MGKVMAAVKDRLGSQLDMSKASGWVKAALG
HHHHHHHHHHHHCCCCCHHHHCCHHHHCCC
>Mature Secondary Structure
MIRDDIKAAQVAAMKSGDKARLGTIRLMLAKIKDKDIELRTGTAPDDDDALVTDVLQKMV
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH
KQRRESIAMYEQGGRQDLAEIEAAEVAVIEAFLPAQLSDDEAMAAIKAIVVELGAESLKD
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHH
MGKVMAAVKDRLGSQLDMSKASGWVKAALG
HHHHHHHHHHHHCCCCCHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]