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The map label for this gene is yhbQ [C]

Identifier: 103486470

GI number: 103486470

Start: 1007051

End: 1007464

Strand: Reverse

Name: yhbQ [C]

Synonym: Sala_0981

Alternate gene names: 103486470

Gene position: 1007464-1007051 (Counterclockwise)

Preceding gene: 103486471

Following gene: 103486469

Centisome position: 30.12

GC content: 58.7

Gene sequence:

>414_bases
ATGGCGTTCTGGACCTATATCCTCCTCTGTGCCGATGGGCTCTATTACACCGGGCATACCGACAATCTTGAGTTCAGGAT
CGCCCAGCATCAAAGCGGATTGATCGAAGGCTTCACCTCGTCGCGCTTGCCCGTCCGCCTTATGTGGTCGCAAGACTTCG
CCACGCGCTATGAAGCACTGGATGCCGAAGCGCGGATCAAAAAATGGTCGCGGGCGAAGAAGGAAGCGTTGATCCGTGGG
GATTGGGAAGCCGTGAGCCATTTCGCCAAACCACCCAAGGAGCGCCCCACCTCTCCGTTCGCATCGAGCGAAGTCGAGAT
GCCCGTCGAAATAGCGCCCAGCCCGATTGGTGTCTCGACTTCGCTCGACACGAGCGGGAATAGAGGCTTGCCCAGTGGCG
GAGGCAACCCATGA

Upstream 100 bases:

>100_bases
TTTTTCTGTTCGCATCGAGCGAAGTCGGGACACCCATCGGCATGGAACGAGGTCGAGGGGCATCTCGACTTCGCTCGATG
CGAACGGGTAGATAGGCGGG

Downstream 100 bases:

>100_bases
CCCTCACCCCGCAATGGCTTGACGAACTGCGCTCGCGGATCACGCTGTCGACCCTCATCGGGCGCACTGTGAAGATCACG
CGCGCGGGCCGCGAGTATAA

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAFWTYILLCADGLYYTGHTDNLEFRIAQHQSGLIEGFTSSRLPVRLMWSQDFATRYEALDAEARIKKWSRAKKEALIRG
DWEAVSHFAKPPKERPTSPFASSEVEMPVEIAPSPIGVSTSLDTSGNRGLPSGGGNP

Sequences:

>Translated_137_residues
MAFWTYILLCADGLYYTGHTDNLEFRIAQHQSGLIEGFTSSRLPVRLMWSQDFATRYEALDAEARIKKWSRAKKEALIRG
DWEAVSHFAKPPKERPTSPFASSEVEMPVEIAPSPIGVSTSLDTSGNRGLPSGGGNP
>Mature_136_residues
AFWTYILLCADGLYYTGHTDNLEFRIAQHQSGLIEGFTSSRLPVRLMWSQDFATRYEALDAEARIKKWSRAKKEALIRGD
WEAVSHFAKPPKERPTSPFASSEVEMPVEIAPSPIGVSTSLDTSGNRGLPSGGGNP

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 15173; Mature: 15042

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFWTYILLCADGLYYTGHTDNLEFRIAQHQSGLIEGFTSSRLPVRLMWSQDFATRYEAL
CHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCHHHHHHHC
DAEARIKKWSRAKKEALIRGDWEAVSHFAKPPKERPTSPFASSEVEMPVEIAPSPIGVST
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
SLDTSGNRGLPSGGGNP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFWTYILLCADGLYYTGHTDNLEFRIAQHQSGLIEGFTSSRLPVRLMWSQDFATRYEAL
HHHHHHHHHHCCCEECCCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCHHHHHHHC
DAEARIKKWSRAKKEALIRGDWEAVSHFAKPPKERPTSPFASSEVEMPVEIAPSPIGVST
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
SLDTSGNRGLPSGGGNP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA