The gene/protein map for NC_008048 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yceI [H]

Identifier: 103486465

GI number: 103486465

Start: 1000692

End: 1001333

Strand: Reverse

Name: yceI [H]

Synonym: Sala_0976

Alternate gene names: 103486465

Gene position: 1001333-1000692 (Counterclockwise)

Preceding gene: 103486466

Following gene: 103486464

Centisome position: 29.93

GC content: 65.58

Gene sequence:

>642_bases
ATGCGCCGCATCGCCCCCTTTGCCGCTCTTGCCCTCACCGCCGCCGCCGCGACGATCGTCGTCGCGCAGGATTCGGGCGT
CCCCGGCGCCCCCGACAAATCGCGCGTTGCCGCGGGCACCTATGTCGCCGATCCGCTTCACACGATGGTCGTCTGGGAAG
TCGATCATTTCGGCTTCAGCAAATATACGGGCATATTCGGCGACGTGACCGGGACGCTGGTGATCGATCCCGCCAATCCT
GCCGCGGCCAGGGTCGAGGTGACGATCCCCGTCGCGAAGGTGACGACCGCCAGCGCCGGGCTGACCAGCCACCTGCTGCG
CGCGGGCAAGGATGGCGGCAAGCCCGACTTCTTCGGCGCTGCCCCCGCCGACGCCAGGTTCGTCTCAACCAGCGTTGTCG
TCGATCCCGAAGGCGACGAAGCCACGGTGACCGGCAACCTGACCCTTAACGGCGTGACCAGGCCCGTCACGCTCGACGTC
GATTTCCACGGCGCGGGCACCAATCCGTTCAACAAGAAGGCGACCATCGGGTTCGAGGCCGAAGGCACGATCCGCCGCAG
CGATTTCGGCATCGCCTATGGCATCCCGGTGGTCAGCGACGAGGTCGAACTGGAAATCCACGCCGCTTTCGAAAAACAAT
AA

Upstream 100 bases:

>100_bases
CATCGATGCACTGATGGAAATGCAGCGTTTCTCCAGCACCGGTTGACGGCACGCTGCGCGCTCGCCTAGCCTTGCGCGTC
CCCCACAACAGGAGCTTTCC

Downstream 100 bases:

>100_bases
GCGGCGTTGCCGGATGGCCGCACCGGCCCGCCCCCCATCTCGGGCGACGCCGCCGACGCGCTCACCGAGGTCGAGGCCGC
GTGGGGGAGGGTCCGCTCGA

Product: YceI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MRRIAPFAALALTAAAATIVVAQDSGVPGAPDKSRVAAGTYVADPLHTMVVWEVDHFGFSKYTGIFGDVTGTLVIDPANP
AAARVEVTIPVAKVTTASAGLTSHLLRAGKDGGKPDFFGAAPADARFVSTSVVVDPEGDEATVTGNLTLNGVTRPVTLDV
DFHGAGTNPFNKKATIGFEAEGTIRRSDFGIAYGIPVVSDEVELEIHAAFEKQ

Sequences:

>Translated_213_residues
MRRIAPFAALALTAAAATIVVAQDSGVPGAPDKSRVAAGTYVADPLHTMVVWEVDHFGFSKYTGIFGDVTGTLVIDPANP
AAARVEVTIPVAKVTTASAGLTSHLLRAGKDGGKPDFFGAAPADARFVSTSVVVDPEGDEATVTGNLTLNGVTRPVTLDV
DFHGAGTNPFNKKATIGFEAEGTIRRSDFGIAYGIPVVSDEVELEIHAAFEKQ
>Mature_213_residues
MRRIAPFAALALTAAAATIVVAQDSGVPGAPDKSRVAAGTYVADPLHTMVVWEVDHFGFSKYTGIFGDVTGTLVIDPANP
AAARVEVTIPVAKVTTASAGLTSHLLRAGKDGGKPDFFGAAPADARFVSTSVVVDPEGDEATVTGNLTLNGVTRPVTLDV
DFHGAGTNPFNKKATIGFEAEGTIRRSDFGIAYGIPVVSDEVELEIHAAFEKQ

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=161, Percent_Identity=43.4782608695652, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 22079; Mature: 22079

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIAPFAALALTAAAATIVVAQDSGVPGAPDKSRVAAGTYVADPLHTMVVWEVDHFGFS
CCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEECCEECCCCEEEEEEEECCCCCH
KYTGIFGDVTGTLVIDPANPAAARVEVTIPVAKVTTASAGLTSHLLRAGKDGGKPDFFGA
HHCCEECCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCC
APADARFVSTSVVVDPEGDEATVTGNLTLNGVTRPVTLDVDFHGAGTNPFNKKATIGFEA
CCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EGTIRRSDFGIAYGIPVVSDEVELEIHAAFEKQ
CCCEEECCCCEEECCCEECCCEEEEEEEEECCC
>Mature Secondary Structure
MRRIAPFAALALTAAAATIVVAQDSGVPGAPDKSRVAAGTYVADPLHTMVVWEVDHFGFS
CCCCCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEECCEECCCCEEEEEEEECCCCCH
KYTGIFGDVTGTLVIDPANPAAARVEVTIPVAKVTTASAGLTSHLLRAGKDGGKPDFFGA
HHCCEECCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCC
APADARFVSTSVVVDPEGDEATVTGNLTLNGVTRPVTLDVDFHGAGTNPFNKKATIGFEA
CCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECC
EGTIRRSDFGIAYGIPVVSDEVELEIHAAFEKQ
CCCEEECCCCEEECCCEECCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA