Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486458

Identifier: 103486458

GI number: 103486458

Start: 993781

End: 994434

Strand: Reverse

Name: 103486458

Synonym: Sala_0968

Alternate gene names: NA

Gene position: 994434-993781 (Counterclockwise)

Preceding gene: 103486459

Following gene: 103486457

Centisome position: 29.73

GC content: 66.51

Gene sequence:

>654_bases
ATGCCGTTCGATACCGCCGCCCATGCCGCCATGGTTGTCCGCAAGGTCGAGGACGTGACGCACGCGGGCCAGCCCTGCCG
CGCCGTCGTCGCCGCGCGCGCCTATGCCACCGACATCGACGATCTGTGGAATGCGATCACCGACAAGGCGCGCATCGCGC
GCTGGTTCGCCCCCGTGGAGGGCGACCTTGAACTTGGCGGCAAATATCAGATCAAAGGCAATGCCGGCGGCACCGTCACC
GCGTGCGAGCCGCCGAAGGGCTTTGCCCTCACCTGGGAGTTTGGCGGCGGTGTGAGCTGGGTCGAGGTCGAGCTGACGGA
GGCCGGCGACCAGACACAATTGACCCTGAAACATATCGCGCCGCGTGACGGCAAGTCGGAAGAGTTCTGGGACCAGTTCG
GCCCCGGCGCGGTCGGCGTCGGCTGGGACCTGTCGCTGCTCGGCCTCGCCTGGCACCTCGAAACCGGCGATTCGGTTCAG
GAACAATTTGCCGAAACGACATGGCCGTCGAGCGCCGAGGGGCGGGCTTTCGTGGGGGCGAGCAGCGATGGCTGGGCCGC
AGCATCAATTGCTTATGGGACCGATGAGTCAGCCGCACGCCGCGCCGCGACCGCCACGACCGCCTTCTTTACCGGCGTAT
CTGCATCTGAGTGA

Upstream 100 bases:

>100_bases
GATACGCTTGCGGATCGGTTTGATTGGGCTGCTCGATCGGGCTACTTGATATATAAGTTTGAACTTATATGATGTCCCGA
CAGAAATCGGGAGAATCATC

Downstream 100 bases:

>100_bases
TGCACGCCTTCGACATCCTCGGCGATCCCGTCCGCCGCCGCATCCTCGAATTGCTTGCTGATGGGCAAATGGCGTCGGGC
GAGATCGTCGAGGTAATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Aha1 Domain-Containing Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPFDTAAHAAMVVRKVEDVTHAGQPCRAVVAARAYATDIDDLWNAITDKARIARWFAPVEGDLELGGKYQIKGNAGGTVT
ACEPPKGFALTWEFGGGVSWVEVELTEAGDQTQLTLKHIAPRDGKSEEFWDQFGPGAVGVGWDLSLLGLAWHLETGDSVQ
EQFAETTWPSSAEGRAFVGASSDGWAAASIAYGTDESAARRAATATTAFFTGVSASE

Sequences:

>Translated_217_residues
MPFDTAAHAAMVVRKVEDVTHAGQPCRAVVAARAYATDIDDLWNAITDKARIARWFAPVEGDLELGGKYQIKGNAGGTVT
ACEPPKGFALTWEFGGGVSWVEVELTEAGDQTQLTLKHIAPRDGKSEEFWDQFGPGAVGVGWDLSLLGLAWHLETGDSVQ
EQFAETTWPSSAEGRAFVGASSDGWAAASIAYGTDESAARRAATATTAFFTGVSASE
>Mature_216_residues
PFDTAAHAAMVVRKVEDVTHAGQPCRAVVAARAYATDIDDLWNAITDKARIARWFAPVEGDLELGGKYQIKGNAGGTVTA
CEPPKGFALTWEFGGGVSWVEVELTEAGDQTQLTLKHIAPRDGKSEEFWDQFGPGAVGVGWDLSLLGLAWHLETGDSVQE
QFAETTWPSSAEGRAFVGASSDGWAAASIAYGTDESAARRAATATTAFFTGVSASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22970; Mature: 22839

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFDTAAHAAMVVRKVEDVTHAGQPCRAVVAARAYATDIDDLWNAITDKARIARWFAPVE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GDLELGGKYQIKGNAGGTVTACEPPKGFALTWEFGGGVSWVEVELTEAGDQTQLTLKHIA
CCEECCCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEEECC
PRDGKSEEFWDQFGPGAVGVGWDLSLLGLAWHLETGDSVQEQFAETTWPSSAEGRAFVGA
CCCCCCHHHHHHCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEC
SSDGWAAASIAYGTDESAARRAATATTAFFTGVSASE
CCCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure 
PFDTAAHAAMVVRKVEDVTHAGQPCRAVVAARAYATDIDDLWNAITDKARIARWFAPVE
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GDLELGGKYQIKGNAGGTVTACEPPKGFALTWEFGGGVSWVEVELTEAGDQTQLTLKHIA
CCEECCCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEEEEEEEECCCCCEEEEEEECC
PRDGKSEEFWDQFGPGAVGVGWDLSLLGLAWHLETGDSVQEQFAETTWPSSAEGRAFVGA
CCCCCCHHHHHHCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEC
SSDGWAAASIAYGTDESAARRAATATTAFFTGVSASE
CCCCCEEEEEEECCCHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA