| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is zraS [H]
Identifier: 103486439
GI number: 103486439
Start: 972009
End: 974129
Strand: Direct
Name: zraS [H]
Synonym: Sala_0949
Alternate gene names: 103486439
Gene position: 972009-974129 (Clockwise)
Preceding gene: 103486438
Following gene: 103486440
Centisome position: 29.06
GC content: 68.65
Gene sequence:
>2121_bases GTGGCGGCAATGGACGGCCTTTCGCAGCTTTTGTCAGGCATGGCGCTCGTCGGCTTTGCCGGAGCGGCGCTGTGGCTGCT GTTGCGGCCCCGCGCGCGCATGGCGGCGTTGATGCCCGCGCCGCGCCTGCTTGCGCTGGGGGCGGCGACGACGGCGCTGT GGGCGGCGGCCATGATGCGCTTTACACCGGGTGCGCCGCAGGTGCTGGTGGTGCAGACGCTGCGCGACGCGGCGATGCTT GTCTGGCTCGGCGCGACCTTCTGGTCGGCGCGCGCGCCCATGGCGCGGTCGTTGCGACTTATCCTGCGGATGCTCGTCAC TGTCTGCGTGTTGACGCTGCTGCTCGGCGTCGCGGCTTATTGGCGCGGCGGGGCGGCGGCGGGTCCGTGGATGGGATCGA CGCTGACGTTCGCCGCGATGGTGGTGGCGACCGGTGGGTTGGTCATCGTCGATGCGGGGGTGCGTCAGGGCAGCGCTGGG CTGAGGATGCCGGTGATGGCGGTCGCGGGCGGCTTTGCAATGCTCTGGGCTTACCAGCTCAACGTCCAGCTGATCGGCGC GCTGACAGGCACGCGCGCATCGACGCTGATCGCGCTGCTTCCCGCGGTCGCGCTGCTGGCGCTGCCAACCTATGTCGTGG CGGCGATGGACATCGGGCGCGAGCGGATGCGGTTGTCACGTCCCGCCGCGACACGCGCGCTGACCCTGCTGGGCGCGGCC TGCTACCTGATCCTGATCGCGCTGACCGTTGCCGCCGCCCGCGCCATGGGCGGCGATTATGCGGAACTGGCGCAGGCCAT CTCGCTGCTCGCGCTGTCGGGCGCGGCAGTGCTGATGCTTGCCTCGGCGCGGTCGCGCGCGTGGCTGTCGGTGATGATCT CGAAGCATTTTTTCGAGCATCGTTATGATTATCGCGCCGAATGGATGCGCTTCACCGCGACGCTGGCGCAGGGCGCCAAA GGCGACGGCGGTGAGGATGACCGCAATCTTTACCGCCGCGTCGCCAAGGCGCTCGCCGAACTGACGGGCAGCCCCGGCGC GCTGCTGATGACGCCAGCGGCCGCGGGCGGTTTTCGCATCGCCGAACAATGGTGCTGGCCGGGCGACGTGGCGGACGATG CGACGCTGTCGCTGCGGTCGGCCTTCATGCTTCAGGAAACGCAGCATATCGTCGAACTCGATGCCGAAAGGCGCGGGCAG GGTGGCCAGGATCTGGCCATCCCACAATGGTTGCTCGCCGACACGCGCGCGTGGGTGGTCGTGCCTGTGCTGCATTTCCA GCGGATGATCGCGATCGCGGTGCTGCACCGTCCCGCGGTGTCGCGCGCGCTCGACTGGGAGGATCTCGACGTGCTGCGTA TCGCGGGGCAGCAGGCGGCCAGCTATATCGCCGAATCGCAGAGCCAGCGGGCGCTGTCCGAGGCGCGGCGCTTCGACGAG TTCAACCGCCGCTTTGCCTTCATCATGCACGACATCAAGAATCTGGCGAGCCAGCTCGGCCTGTTGGCGCGCAACGCCGA GCGCCACGCCGACAATCCGGCGTTCCGCGCCGACATGACGCAGACGCTGAAGATTTCGGCGGGGCGGCTGTCCGATCTGC TCGTCCGCCTGTCGCCGCGCGAGCATGCACCGACGGCCGATCCGGGGTGGGTTCCGGTCGAACCGATACTGAAAGACATC GCCGCCGAAGTACGGCCGCGCCGCGAGCTGTTCATCGGGTGCGAGGCCGGCCTTGCCGCGTGGGCCGATGCGGGCTCGGT GCGACGGATCGTCGGGCATCTCGTCGCCAATGCGATCGAGGCCTCTGCCGCGGGAATGCCGGTGCAGATCGTCGCGGTCG CCGAACAGGGACGCGTGCGGATCGACGTGATCGACCAGGGATGCGGCATGACGCGCGAGTTCATTCGCGACGAGCTGTTC AAGCCCTTTGTCTCGACCAAGGACAGCGGGTTCGGACTCGGGGCGTTCGAGGCGCTGCAGTTGGCTCAGGCGATGGGCGG CGCGATCGAGGTGGCCAGCGAAGTCGGCGAAGGAAGCAATTTCACATTGTGGCTGCCGCTCGCCGACGCGTCCAGCGCCG CGGTGGTTGACGCGCGGGCGATCAATGGGGGGCGGACATGA
Upstream 100 bases:
>100_bases TATGACCTCTACTACGCCAAAAATTATTCGCCCTTCCTCGACCTTCTGATCCTGCTCCAGACCGTGCGCGTCGTGCTGTG GCCCGAGGGAGCACGCTAGC
Downstream 100 bases:
>100_bases ACGAAACGGCGGCAGCCCGTCGCAAACTGCTGGTGGTCGAGGATGATCCGGGGCTGCAGACGCAGCTCAAATGGGCCTAT GAAGATTATCAGGTGTTCGT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MAAMDGLSQLLSGMALVGFAGAALWLLLRPRARMAALMPAPRLLALGAATTALWAAAMMRFTPGAPQVLVVQTLRDAAML VWLGATFWSARAPMARSLRLILRMLVTVCVLTLLLGVAAYWRGGAAAGPWMGSTLTFAAMVVATGGLVIVDAGVRQGSAG LRMPVMAVAGGFAMLWAYQLNVQLIGALTGTRASTLIALLPAVALLALPTYVVAAMDIGRERMRLSRPAATRALTLLGAA CYLILIALTVAAARAMGGDYAELAQAISLLALSGAAVLMLASARSRAWLSVMISKHFFEHRYDYRAEWMRFTATLAQGAK GDGGEDDRNLYRRVAKALAELTGSPGALLMTPAAAGGFRIAEQWCWPGDVADDATLSLRSAFMLQETQHIVELDAERRGQ GGQDLAIPQWLLADTRAWVVVPVLHFQRMIAIAVLHRPAVSRALDWEDLDVLRIAGQQAASYIAESQSQRALSEARRFDE FNRRFAFIMHDIKNLASQLGLLARNAERHADNPAFRADMTQTLKISAGRLSDLLVRLSPREHAPTADPGWVPVEPILKDI AAEVRPRRELFIGCEAGLAAWADAGSVRRIVGHLVANAIEASAAGMPVQIVAVAEQGRVRIDVIDQGCGMTREFIRDELF KPFVSTKDSGFGLGAFEALQLAQAMGGAIEVASEVGEGSNFTLWLPLADASSAAVVDARAINGGRT
Sequences:
>Translated_706_residues MAAMDGLSQLLSGMALVGFAGAALWLLLRPRARMAALMPAPRLLALGAATTALWAAAMMRFTPGAPQVLVVQTLRDAAML VWLGATFWSARAPMARSLRLILRMLVTVCVLTLLLGVAAYWRGGAAAGPWMGSTLTFAAMVVATGGLVIVDAGVRQGSAG LRMPVMAVAGGFAMLWAYQLNVQLIGALTGTRASTLIALLPAVALLALPTYVVAAMDIGRERMRLSRPAATRALTLLGAA CYLILIALTVAAARAMGGDYAELAQAISLLALSGAAVLMLASARSRAWLSVMISKHFFEHRYDYRAEWMRFTATLAQGAK GDGGEDDRNLYRRVAKALAELTGSPGALLMTPAAAGGFRIAEQWCWPGDVADDATLSLRSAFMLQETQHIVELDAERRGQ GGQDLAIPQWLLADTRAWVVVPVLHFQRMIAIAVLHRPAVSRALDWEDLDVLRIAGQQAASYIAESQSQRALSEARRFDE FNRRFAFIMHDIKNLASQLGLLARNAERHADNPAFRADMTQTLKISAGRLSDLLVRLSPREHAPTADPGWVPVEPILKDI AAEVRPRRELFIGCEAGLAAWADAGSVRRIVGHLVANAIEASAAGMPVQIVAVAEQGRVRIDVIDQGCGMTREFIRDELF KPFVSTKDSGFGLGAFEALQLAQAMGGAIEVASEVGEGSNFTLWLPLADASSAAVVDARAINGGRT >Mature_705_residues AAMDGLSQLLSGMALVGFAGAALWLLLRPRARMAALMPAPRLLALGAATTALWAAAMMRFTPGAPQVLVVQTLRDAAMLV WLGATFWSARAPMARSLRLILRMLVTVCVLTLLLGVAAYWRGGAAAGPWMGSTLTFAAMVVATGGLVIVDAGVRQGSAGL RMPVMAVAGGFAMLWAYQLNVQLIGALTGTRASTLIALLPAVALLALPTYVVAAMDIGRERMRLSRPAATRALTLLGAAC YLILIALTVAAARAMGGDYAELAQAISLLALSGAAVLMLASARSRAWLSVMISKHFFEHRYDYRAEWMRFTATLAQGAKG DGGEDDRNLYRRVAKALAELTGSPGALLMTPAAAGGFRIAEQWCWPGDVADDATLSLRSAFMLQETQHIVELDAERRGQG GQDLAIPQWLLADTRAWVVVPVLHFQRMIAIAVLHRPAVSRALDWEDLDVLRIAGQQAASYIAESQSQRALSEARRFDEF NRRFAFIMHDIKNLASQLGLLARNAERHADNPAFRADMTQTLKISAGRLSDLLVRLSPREHAPTADPGWVPVEPILKDIA AEVRPRRELFIGCEAGLAAWADAGSVRRIVGHLVANAIEASAAGMPVQIVAVAEQGRVRIDVIDQGCGMTREFIRDELFK PFVSTKDSGFGLGAFEALQLAQAMGGAIEVASEVGEGSNFTLWLPLADASSAAVVDARAINGGRT
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75462; Mature: 75331
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMDGLSQLLSGMALVGFAGAALWLLLRPRARMAALMPAPRLLALGAATTALWAAAMMR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FTPGAPQVLVVQTLRDAAMLVWLGATFWSARAPMARSLRLILRMLVTVCVLTLLLGVAAY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WRGGAAAGPWMGSTLTFAAMVVATGGLVIVDAGVRQGSAGLRMPVMAVAGGFAMLWAYQL HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH NVQLIGALTGTRASTLIALLPAVALLALPTYVVAAMDIGRERMRLSRPAATRALTLLGAA CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH CYLILIALTVAAARAMGGDYAELAQAISLLALSGAAVLMLASARSRAWLSVMISKHFFEH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHH RYDYRAEWMRFTATLAQGAKGDGGEDDRNLYRRVAKALAELTGSPGALLMTPAAAGGFRI HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH AEQWCWPGDVADDATLSLRSAFMLQETQHIVELDAERRGQGGQDLAIPQWLLADTRAWVV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCCCCEE VPVLHFQRMIAIAVLHRPAVSRALDWEDLDVLRIAGQQAASYIAESQSQRALSEARRFDE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNRRFAFIMHDIKNLASQLGLLARNAERHADNPAFRADMTQTLKISAGRLSDLLVRLSPR HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHCCHHHHEECHHHHHHHHHHCCCC EHAPTADPGWVPVEPILKDIAAEVRPRRELFIGCEAGLAAWADAGSVRRIVGHLVANAIE CCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHCCCHHHHHHHHHHHHHHH ASAAGMPVQIVAVAEQGRVRIDVIDQGCGMTREFIRDELFKPFVSTKDSGFGLGAFEALQ HHCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LAQAMGGAIEVASEVGEGSNFTLWLPLADASSAAVVDARAINGGRT HHHHHCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure AAMDGLSQLLSGMALVGFAGAALWLLLRPRARMAALMPAPRLLALGAATTALWAAAMMR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FTPGAPQVLVVQTLRDAAMLVWLGATFWSARAPMARSLRLILRMLVTVCVLTLLLGVAAY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WRGGAAAGPWMGSTLTFAAMVVATGGLVIVDAGVRQGSAGLRMPVMAVAGGFAMLWAYQL HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH NVQLIGALTGTRASTLIALLPAVALLALPTYVVAAMDIGRERMRLSRPAATRALTLLGAA CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHH CYLILIALTVAAARAMGGDYAELAQAISLLALSGAAVLMLASARSRAWLSVMISKHFFEH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHH RYDYRAEWMRFTATLAQGAKGDGGEDDRNLYRRVAKALAELTGSPGALLMTPAAAGGFRI HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH AEQWCWPGDVADDATLSLRSAFMLQETQHIVELDAERRGQGGQDLAIPQWLLADTRAWVV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHCCCCCEE VPVLHFQRMIAIAVLHRPAVSRALDWEDLDVLRIAGQQAASYIAESQSQRALSEARRFDE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNRRFAFIMHDIKNLASQLGLLARNAERHADNPAFRADMTQTLKISAGRLSDLLVRLSPR HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHCCHHHHEECHHHHHHHHHHCCCC EHAPTADPGWVPVEPILKDIAAEVRPRRELFIGCEAGLAAWADAGSVRRIVGHLVANAIE CCCCCCCCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHCCCHHHHHHHHHHHHHHH ASAAGMPVQIVAVAEQGRVRIDVIDQGCGMTREFIRDELFKPFVSTKDSGFGLGAFEALQ HHCCCCCEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LAQAMGGAIEVASEVGEGSNFTLWLPLADASSAAVVDARAINGGRT HHHHHCHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]