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The map label for this gene is 103486434

Identifier: 103486434

GI number: 103486434

Start: 963812

End: 965200

Strand: Direct

Name: 103486434

Synonym: Sala_0944

Alternate gene names: NA

Gene position: 963812-965200 (Clockwise)

Preceding gene: 103486432

Following gene: 103486438

Centisome position: 28.81

GC content: 72.35

Gene sequence:

>1389_bases
ATGATCGAGCGGCGGGTGTTTGCGGGGCCGGCGGTGCGGCGGGCGCGGCGCGCGGCGGGGATGACCCAGGCCGCGATGGC
CGACGCGCTGGACATATCGCCGAGCTACCTCAACCTGATCGAGAACGGCCAGCGCCCGCTGTCGGCCACAGTCCTGGTAA
AGCTGGCCGAACGCTTTGCGTTCGACGCCGCGACCTTGGGCGGCGAGGCGGTGGCGGGGGGCGCGGCGGGGCTCAAACGG
CGGATCGCCGACCCGCGCTTCGCCGACCTGGGCATCGGCGCCGACGAGGTCGAGGCGTGGCTCCAGACCGCGCCCGCGAC
CGCCGCGGCCTTCGCGCGACTGTTCGACGCGGCCCCCGAGGCGGCGGCGGAAGGTGACGGCGACGCACCCGAAGTGGCCG
CGGTGCGCCGCGCGATCGAAAAATGGCGCAACCATTTCGCCGACCTCGACGCCCGCGCCGAGGAACTGGCCGACGAGTTG
CGGCTCGCGGGGGGCGACCTCTATGGCACGATTTCGGAGCGTTTGCGCACGCGCCACCAGCTCGGCATCCGCATCCTGCC
CAGCGACGTGATGCCCGACCGCCTCCGCTGGCTCGACTGGCACGCGCGGCAACTGATGCTGAGCGAACTTCTACGCCCCG
CCTCGCGGACCTTTCAGGCGGCGGCGACGCTGGCGCAGATCGAGGCGAAGGGCGAGATCGACGCGCTGGTCGCGGGCGCC
GAATTCGCCGAAGCCGCCGCGGCGCGGCTGTTCGAGCGGCACCTGATCCATTATTTCGCGGCGGCGCTGATGATGCCTTA
CGGCCGTTTCCTGCGCGCCTGCGATGCGACGGGATATGATCTGCTGCTGCTCCAGCGGCGCTTTGGCGCGGGTTTCGAGC
AGGTCGCGCACCGGCTGACGACGCTCCAGCGCGTCGGCGCGCGCGGGCTGCCCTTCTTCATGCTGCGTATCGACCGCGCG
GGGCAGGGGAGCAAGCGCTACGCCGGGGCGAGCCAGTCGCCGCTGACCGACGGTGACGCGCGCTGCCCGTTGTGGGGAAT
CCACGAAGCGTTCGCGCGGCCGGGCGAGGTGATCGCCGATCTGGTCGAGCTGGAGGACGGGACGCGCTGGTTCACGCAAA
GCCGCAGCGTCGCCGCCCCCGGCGCGACCGGGAGCGGCACGCCCGCGCGCTTCGCGGTATGCGTCGGCGTCGATGCCAAG
GTCGCGGCGCCCTTGATCGCCGCGCGCGGCATCGACCTGATGCGATCGCCCGCAACCCCTATCGGTCTGGGATGTCGCCG
CTGCACGCGCACCGGATGCGTGCAGCGGTCAATGCCGCCACGCGGCCGCCCGCTGCGGTTCCGCGACGGCGAGCGCGGGG
TGAGCGCGTTCGATTTCGCCGGGGATTGA

Upstream 100 bases:

>100_bases
CGAAGGTGTCGCGGAAAGGGAAAAGATTTGTCAATAATATTTGTGAAATACCGCCGATAGGTGTAAATCAGCGTGTAAAT
TAGTAAAGAAAGTTACAAAG

Downstream 100 bases:

>100_bases
GGCACGAGAATCCCTTGGGACCGCCGAATCTTAACGATCAAAGCCCTTCGGGCGCGGCGGCCGGTTGGCTGGCGCGCGCC
TTGCGTGCCGCGATCTCGGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MIERRVFAGPAVRRARRAAGMTQAAMADALDISPSYLNLIENGQRPLSATVLVKLAERFAFDAATLGGEAVAGGAAGLKR
RIADPRFADLGIGADEVEAWLQTAPATAAAFARLFDAAPEAAAEGDGDAPEVAAVRRAIEKWRNHFADLDARAEELADEL
RLAGGDLYGTISERLRTRHQLGIRILPSDVMPDRLRWLDWHARQLMLSELLRPASRTFQAAATLAQIEAKGEIDALVAGA
EFAEAAAARLFERHLIHYFAAALMMPYGRFLRACDATGYDLLLLQRRFGAGFEQVAHRLTTLQRVGARGLPFFMLRIDRA
GQGSKRYAGASQSPLTDGDARCPLWGIHEAFARPGEVIADLVELEDGTRWFTQSRSVAAPGATGSGTPARFAVCVGVDAK
VAAPLIAARGIDLMRSPATPIGLGCRRCTRTGCVQRSMPPRGRPLRFRDGERGVSAFDFAGD

Sequences:

>Translated_462_residues
MIERRVFAGPAVRRARRAAGMTQAAMADALDISPSYLNLIENGQRPLSATVLVKLAERFAFDAATLGGEAVAGGAAGLKR
RIADPRFADLGIGADEVEAWLQTAPATAAAFARLFDAAPEAAAEGDGDAPEVAAVRRAIEKWRNHFADLDARAEELADEL
RLAGGDLYGTISERLRTRHQLGIRILPSDVMPDRLRWLDWHARQLMLSELLRPASRTFQAAATLAQIEAKGEIDALVAGA
EFAEAAAARLFERHLIHYFAAALMMPYGRFLRACDATGYDLLLLQRRFGAGFEQVAHRLTTLQRVGARGLPFFMLRIDRA
GQGSKRYAGASQSPLTDGDARCPLWGIHEAFARPGEVIADLVELEDGTRWFTQSRSVAAPGATGSGTPARFAVCVGVDAK
VAAPLIAARGIDLMRSPATPIGLGCRRCTRTGCVQRSMPPRGRPLRFRDGERGVSAFDFAGD
>Mature_462_residues
MIERRVFAGPAVRRARRAAGMTQAAMADALDISPSYLNLIENGQRPLSATVLVKLAERFAFDAATLGGEAVAGGAAGLKR
RIADPRFADLGIGADEVEAWLQTAPATAAAFARLFDAAPEAAAEGDGDAPEVAAVRRAIEKWRNHFADLDARAEELADEL
RLAGGDLYGTISERLRTRHQLGIRILPSDVMPDRLRWLDWHARQLMLSELLRPASRTFQAAATLAQIEAKGEIDALVAGA
EFAEAAAARLFERHLIHYFAAALMMPYGRFLRACDATGYDLLLLQRRFGAGFEQVAHRLTTLQRVGARGLPFFMLRIDRA
GQGSKRYAGASQSPLTDGDARCPLWGIHEAFARPGEVIADLVELEDGTRWFTQSRSVAAPGATGSGTPARFAVCVGVDAK
VAAPLIAARGIDLMRSPATPIGLGCRRCTRTGCVQRSMPPRGRPLRFRDGERGVSAFDFAGD

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 49859; Mature: 49859

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERRVFAGPAVRRARRAAGMTQAAMADALDISPSYLNLIENGQRPLSATVLVKLAERFA
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDAATLGGEAVAGGAAGLKRRIADPRFADLGIGADEVEAWLQTAPATAAAFARLFDAAPE
HHHHHCCCHHHCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCH
AAAEGDGDAPEVAAVRRAIEKWRNHFADLDARAEELADELRLAGGDLYGTISERLRTRHQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGIRILPSDVMPDRLRWLDWHARQLMLSELLRPASRTFQAAATLAQIEAKGEIDALVAGA
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCH
EFAEAAAARLFERHLIHYFAAALMMPYGRFLRACDATGYDLLLLQRRFGAGFEQVAHRLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
TLQRVGARGLPFFMLRIDRAGQGSKRYAGASQSPLTDGDARCPLWGIHEAFARPGEVIAD
HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LVELEDGTRWFTQSRSVAAPGATGSGTPARFAVCVGVDAKVAAPLIAARGIDLMRSPATP
HHHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHCCCCC
IGLGCRRCTRTGCVQRSMPPRGRPLRFRDGERGVSAFDFAGD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIERRVFAGPAVRRARRAAGMTQAAMADALDISPSYLNLIENGQRPLSATVLVKLAERFA
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
FDAATLGGEAVAGGAAGLKRRIADPRFADLGIGADEVEAWLQTAPATAAAFARLFDAAPE
HHHHHCCCHHHCCHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCH
AAAEGDGDAPEVAAVRRAIEKWRNHFADLDARAEELADELRLAGGDLYGTISERLRTRHQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGIRILPSDVMPDRLRWLDWHARQLMLSELLRPASRTFQAAATLAQIEAKGEIDALVAGA
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCH
EFAEAAAARLFERHLIHYFAAALMMPYGRFLRACDATGYDLLLLQRRFGAGFEQVAHRLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH
TLQRVGARGLPFFMLRIDRAGQGSKRYAGASQSPLTDGDARCPLWGIHEAFARPGEVIAD
HHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LVELEDGTRWFTQSRSVAAPGATGSGTPARFAVCVGVDAKVAAPLIAARGIDLMRSPATP
HHHHCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCHHHHHCCCCC
IGLGCRRCTRTGCVQRSMPPRGRPLRFRDGERGVSAFDFAGD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]