Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486403

Identifier: 103486403

GI number: 103486403

Start: 923377

End: 923934

Strand: Direct

Name: 103486403

Synonym: Sala_0913

Alternate gene names: NA

Gene position: 923377-923934 (Clockwise)

Preceding gene: 103486402

Following gene: 103486404

Centisome position: 27.6

GC content: 59.32

Gene sequence:

>558_bases
TTGGGAAAAGCCGATAGTGCGGCTGTCGCAATCGCGATCCTCTGCTCTTCGCTGAACCTGCGTCGCGTCAACCCGCCCAA
CTCGCTCTCGTCACACGCCGCCCAAAATCGGTCAGGTTTCAGGGGAGAACGCAATCACCATATCCCAAAGGGGTTCCTCG
TCGACGCCGATCATGGGCCGATTTTGACCGTCGTTTGCCTCCGATTTGCATCAGCTCGGAAACCTGATGTGCGGCGGGGC
GTTTGTGAAGGAAATCGACGCCAGGCGCACCGCGACACGTCGTGCGGGAGATATCGCAGATTCGTTCGCGAACGGATTGC
CGCCATGGGGAACCGCCTCGCCGCCTTCACGGCGACCCCTGTTTTCAAAGCGGCGGCGAGACGGTCGCAATTATCGCCGA
CCGGGCAAGCTGTGCGGAAAATCGCCCGATTTGGCAGATGCCGCCGCCGCCTCCCCTGCGATCCGCGGCCTCATCCTTTC
GCGACAAGGCTTGACGAAGTGAACGTTATCATTTACGTGAACGTTCACAATCTGCGCTTCAATCGCGCAAACACATAA

Upstream 100 bases:

>100_bases
CCGGCTCGACACGGGCAAGCTTTACAAGCGGTCGATCCGCGACCGCTATTGGCCTGTCGCGCCGACATAGGGCGGCTCCG
CACAGCCGCTGTGGGTCGAA

Downstream 100 bases:

>100_bases
TCCTGGGGAGGAATTCGCCGATGAATGATTCGCGGAAGGTCCGTTTCGATCGCTTGGCAATGGGCGTCTCGCTGCTTGCG
ATCGGCATCGCATGTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGKADSAAVAIAILCSSLNLRRVNPPNSLSSHAAQNRSGFRGERNHHIPKGFLVDADHGPILTVVCLRFASARKPDVRRG
VCEGNRRQAHRDTSCGRYRRFVRERIAAMGNRLAAFTATPVFKAAARRSQLSPTGQAVRKIARFGRCRRRLPCDPRPHPF
ATRLDEVNVIIYVNVHNLRFNRANT

Sequences:

>Translated_185_residues
MGKADSAAVAIAILCSSLNLRRVNPPNSLSSHAAQNRSGFRGERNHHIPKGFLVDADHGPILTVVCLRFASARKPDVRRG
VCEGNRRQAHRDTSCGRYRRFVRERIAAMGNRLAAFTATPVFKAAARRSQLSPTGQAVRKIARFGRCRRRLPCDPRPHPF
ATRLDEVNVIIYVNVHNLRFNRANT
>Mature_184_residues
GKADSAAVAIAILCSSLNLRRVNPPNSLSSHAAQNRSGFRGERNHHIPKGFLVDADHGPILTVVCLRFASARKPDVRRGV
CEGNRRQAHRDTSCGRYRRFVRERIAAMGNRLAAFTATPVFKAAARRSQLSPTGQAVRKIARFGRCRRRLPCDPRPHPFA
TRLDEVNVIIYVNVHNLRFNRANT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20688; Mature: 20557

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKADSAAVAIAILCSSLNLRRVNPPNSLSSHAAQNRSGFRGERNHHIPKGFLVDADHGP
CCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
ILTVVCLRFASARKPDVRRGVCEGNRRQAHRDTSCGRYRRFVRERIAAMGNRLAAFTATP
HHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
VFKAAARRSQLSPTGQAVRKIARFGRCRRRLPCDPRPHPFATRLDEVNVIIYVNVHNLRF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEEEEEEEE
NRANT
CCCCC
>Mature Secondary Structure 
GKADSAAVAIAILCSSLNLRRVNPPNSLSSHAAQNRSGFRGERNHHIPKGFLVDADHGP
CCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
ILTVVCLRFASARKPDVRRGVCEGNRRQAHRDTSCGRYRRFVRERIAAMGNRLAAFTATP
HHHHHHHHHHHCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
VFKAAARRSQLSPTGQAVRKIARFGRCRRRLPCDPRPHPFATRLDEVNVIIYVNVHNLRF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEEEEEEEEE
NRANT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA