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The map label for this gene is caiB [C]

Identifier: 103486398

GI number: 103486398

Start: 917908

End: 918873

Strand: Reverse

Name: caiB [C]

Synonym: Sala_0908

Alternate gene names: 103486398

Gene position: 918873-917908 (Counterclockwise)

Preceding gene: 103486399

Following gene: 103486397

Centisome position: 27.47

GC content: 69.05

Gene sequence:

>966_bases
TTGACCGCCTTGCTGGACGCCGTGGCGACCGCAGGCGAGCGGTTGATCGCCGCGTCGGACGGCCGCATCGCGTTCGATCC
GCGCCGCGCGCTATCGCGCGCCGACGATCTTGATCTTGCGCCTCCCGGCGAATGGTCGCCCAATCGGCATTGCAGGCTGA
TCCCCTGTCAGGACGAATGGATCGCCGTGTCGCTCGCCCGCGACGCCGACCGCGATTTAGTGCCGGCGTGGACCGGCTCC
GGCTTCGATGAGGCCCCCTGGGACGCCATTGCCGCGTCGGCAAGAGCAAGACCGGCGACAGCGATGGTGGCCGATGGCGT
CGCGCTGCATCTGCCCGTCGCCCGCATTGGCGAAGCATCGCCGTTCAAGGCGCCGGATCTCTATGAGGGCGCTCGGGACA
ATGGCAGGGTGCTTGACCTGTCCGCGCTGTGGGCCGGCCCCTATTGCGGCGCCCTGCTCGCCGAGGCGGGGCATGAGGTG
GTGAAGGTCGAAAGCACTGCCAGGCCCGATCCTACACCCGTCCACACGCCGCGGCTCGACCGGCGGCTGAACGGTCGAAA
GCGGCGGCGAAACATCCTCTTCGAACCCGGTGCGTTGATGGCGATGGTTGCAAAGGCGCGTGTATTGATCACGTCGGGGC
GCCCCCACGCGCTGGCCCGGCTCGGCCTTGGCGAAGCAGAGGTTTTTGCGGCCAATCCCGATCTGCTATGGATCGCGATC
ACCGCGCACGGCTGGCGCGGCGACGCGGCGATGCGGGTCGGCTTTGGCGATGACTGTGCGGCCGCGGGCGGACTGGTCGC
CTGGAACGGCGACCGCCCGAACTTCATGGGCGACGCGCTCGCCGACCCGCTCACGGGAATCGTTGCCGCCACCCTGGCCC
TCGAAGCCCTGGCTGCGGGGCAATGCGGCGTGATCGACATCGCGCTGGCGCGAACCGCCGCCCATTTTGCGCGGATCGTC
GCATGA

Upstream 100 bases:

>100_bases
TCGGTCGGCACCGGACGCTTTGGATGCTGCTCTCGGGCCGACGGATCAAAGCGCCCACGGCGCTGGAATGGGGACTGGTC
CATCATGTCGAGGAGGCGGC

Downstream 100 bases:

>100_bases
TGCTCCGTTTCGATCTGGTCATCCGCAACGCACGAACGCAGGACGGACGCGCGGTCGACGTCGGGATATGCGAGGGCCGG
ATCGCGGCAATGGACGAGCG

Product: hypothetical protein

Products: 4-(Trimethylammonio)But-2-Enoate; H2O; crotonobetainyl-CoA [C]

Alternate protein names: Formyl-CoA Transferase; Acyl-CoA Transferase; CoA-Transferase; L-Carnitine Dehydratase/Bile Acid-Inducible Protein F; Acyl-CoA Transferase/Carnitine Dehydratase-Like Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTALLDAVATAGERLIAASDGRIAFDPRRALSRADDLDLAPPGEWSPNRHCRLIPCQDEWIAVSLARDADRDLVPAWTGS
GFDEAPWDAIAASARARPATAMVADGVALHLPVARIGEASPFKAPDLYEGARDNGRVLDLSALWAGPYCGALLAEAGHEV
VKVESTARPDPTPVHTPRLDRRLNGRKRRRNILFEPGALMAMVAKARVLITSGRPHALARLGLGEAEVFAANPDLLWIAI
TAHGWRGDAAMRVGFGDDCAAAGGLVAWNGDRPNFMGDALADPLTGIVAATLALEALAAGQCGVIDIALARTAAHFARIV
A

Sequences:

>Translated_321_residues
MTALLDAVATAGERLIAASDGRIAFDPRRALSRADDLDLAPPGEWSPNRHCRLIPCQDEWIAVSLARDADRDLVPAWTGS
GFDEAPWDAIAASARARPATAMVADGVALHLPVARIGEASPFKAPDLYEGARDNGRVLDLSALWAGPYCGALLAEAGHEV
VKVESTARPDPTPVHTPRLDRRLNGRKRRRNILFEPGALMAMVAKARVLITSGRPHALARLGLGEAEVFAANPDLLWIAI
TAHGWRGDAAMRVGFGDDCAAAGGLVAWNGDRPNFMGDALADPLTGIVAATLALEALAAGQCGVIDIALARTAAHFARIV
A
>Mature_320_residues
TALLDAVATAGERLIAASDGRIAFDPRRALSRADDLDLAPPGEWSPNRHCRLIPCQDEWIAVSLARDADRDLVPAWTGSG
FDEAPWDAIAASARARPATAMVADGVALHLPVARIGEASPFKAPDLYEGARDNGRVLDLSALWAGPYCGALLAEAGHEVV
KVESTARPDPTPVHTPRLDRRLNGRKRRRNILFEPGALMAMVAKARVLITSGRPHALARLGLGEAEVFAANPDLLWIAIT
AHGWRGDAAMRVGFGDDCAAAGGLVAWNGDRPNFMGDALADPLTGIVAATLALEALAAGQCGVIDIALARTAAHFARIVA

Specific function: Catalyzes The Reversible Transfer Of The CoA Moiety From Gamma-Butyrobetainyl-CoA Or Crotonobetainyl-CoA To L-Carnitine To Generate L-Carnitinyl-CoA. Is Also Able To Catalyze The Reversible Transfer Of The CoA Moiety From Gamma-Butyrobetainyl-CoA Or L- Ca

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24648431, Length=176, Percent_Identity=31.8181818181818, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24585488, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.8.3.- [C]

Molecular weight: Translated: 33855; Mature: 33724

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLDAVATAGERLIAASDGRIAFDPRRALSRADDLDLAPPGEWSPNRHCRLIPCQDEW
CHHHHHHHHHCCCEEEEECCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCE
IAVSLARDADRDLVPAWTGSGFDEAPWDAIAASARARPATAMVADGVALHLPVARIGEAS
EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCHHHCCCCC
PFKAPDLYEGARDNGRVLDLSALWAGPYCGALLAEAGHEVVKVESTARPDPTPVHTPRLD
CCCCCCHHCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
RRLNGRKRRRNILFEPGALMAMVAKARVLITSGRPHALARLGLGEAEVFAANPDLLWIAI
HHHCCHHHHCCEEECCCHHHHHHHHCEEEEECCCCHHHHHCCCCCCEEEECCCCEEEEEE
TAHGWRGDAAMRVGFGDDCAAAGGLVAWNGDRPNFMGDALADPLTGIVAATLALEALAAG
EECCCCCCCEEEECCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QCGVIDIALARTAAHFARIVA
CCCEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TALLDAVATAGERLIAASDGRIAFDPRRALSRADDLDLAPPGEWSPNRHCRLIPCQDEW
HHHHHHHHHCCCEEEEECCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCE
IAVSLARDADRDLVPAWTGSGFDEAPWDAIAASARARPATAMVADGVALHLPVARIGEAS
EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCEEEECCHHHCCCCC
PFKAPDLYEGARDNGRVLDLSALWAGPYCGALLAEAGHEVVKVESTARPDPTPVHTPRLD
CCCCCCHHCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHH
RRLNGRKRRRNILFEPGALMAMVAKARVLITSGRPHALARLGLGEAEVFAANPDLLWIAI
HHHCCHHHHCCEEECCCHHHHHHHHCEEEEECCCCHHHHHCCCCCCEEEECCCCEEEEEE
TAHGWRGDAAMRVGFGDDCAAAGGLVAWNGDRPNFMGDALADPLTGIVAATLALEALAAG
EECCCCCCCEEEECCCCCHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QCGVIDIALARTAAHFARIVA
CCCEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-Carnitine; L-carnitinyl-CoA [C]

Specific reaction: L-Carnitine = 4-(Trimethylammonio)But-2-Enoate + H2O. L-carnitinyl-CoA = H2O + crotonobetainyl-CoA [C]

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA