Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486352

Identifier: 103486352

GI number: 103486352

Start: 870297

End: 870755

Strand: Reverse

Name: 103486352

Synonym: Sala_0862

Alternate gene names: NA

Gene position: 870755-870297 (Counterclockwise)

Preceding gene: 103486353

Following gene: 103486351

Centisome position: 26.03

GC content: 67.97

Gene sequence:

>459_bases
ATGTCACCGCGCTTCTCCGATTTCGAACGATTCGCCGACGAGCTTGCCCGGCTGCGTGGACGGATGCGGGCGCTCTACGC
CGACACGCGCGCGCAGAGCGGATTGGCCGAAATGGAGCTGACGGTGCTCACCGCCGTGGTCAACGCCGCGACGCCGCCCA
CGGTGGCGCAGATCGGCCGCAGCCTGGGGCATCCGCGCCAGGTGGTGCAGCGGGCGGCGAACCGCCTCGCCGCGCTCGAC
CTGATCGACTTTGCCGACAATCCCGATCACAAACGCGCGTCCTTGATCATCGCGACCGATGCCGGGCGCGCGCTCAAGGC
GGCGGATCATGACCGCGCGCAGGCGGTGACGACCGATATACTCGCGCGGATCGACGGGGAAATGTTCGCCGACGCGGCCG
ACCGGTTGCAAGAGATACGCCAGGGGATCGAAACCTATTTGCGCGCGCGCGACCGATGA

Upstream 100 bases:

>100_bases
GGGTGCGGATCGACTGGCAGACCAAGGCGTCGCTGTTCCGGCCGATGGTTACGCGCCCGAATAATTTGACACCTTGATGT
CATTTTGACATTAAGGTGTC

Downstream 100 bases:

>100_bases
GCGAATTGCGCGCCCTGGCCGATTCCGACCGGCTTTCCGCATGGCTCGACGTGCATGTTCCCGCGCTGGGGCACGGGCCG
CTGGCGATCGGAAAAATCCA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSPRFSDFERFADELARLRGRMRALYADTRAQSGLAEMELTVLTAVVNAATPPTVAQIGRSLGHPRQVVQRAANRLAALD
LIDFADNPDHKRASLIIATDAGRALKAADHDRAQAVTTDILARIDGEMFADAADRLQEIRQGIETYLRARDR

Sequences:

>Translated_152_residues
MSPRFSDFERFADELARLRGRMRALYADTRAQSGLAEMELTVLTAVVNAATPPTVAQIGRSLGHPRQVVQRAANRLAALD
LIDFADNPDHKRASLIIATDAGRALKAADHDRAQAVTTDILARIDGEMFADAADRLQEIRQGIETYLRARDR
>Mature_151_residues
SPRFSDFERFADELARLRGRMRALYADTRAQSGLAEMELTVLTAVVNAATPPTVAQIGRSLGHPRQVVQRAANRLAALDL
IDFADNPDHKRASLIIATDAGRALKAADHDRAQAVTTDILARIDGEMFADAADRLQEIRQGIETYLRARDR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16783; Mature: 16652

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRFSDFERFADELARLRGRMRALYADTRAQSGLAEMELTVLTAVVNAATPPTVAQIGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SLGHPRQVVQRAANRLAALDLIDFADNPDHKRASLIIATDAGRALKAADHDRAQAVTTDI
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHH
LARIDGEMFADAADRLQEIRQGIETYLRARDR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPRFSDFERFADELARLRGRMRALYADTRAQSGLAEMELTVLTAVVNAATPPTVAQIGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SLGHPRQVVQRAANRLAALDLIDFADNPDHKRASLIIATDAGRALKAADHDRAQAVTTDI
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHH
LARIDGEMFADAADRLQEIRQGIETYLRARDR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA