Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486351

Identifier: 103486351

GI number: 103486351

Start: 869236

End: 870300

Strand: Reverse

Name: 103486351

Synonym: Sala_0861

Alternate gene names: NA

Gene position: 870300-869236 (Counterclockwise)

Preceding gene: 103486352

Following gene: 103486350

Centisome position: 26.02

GC content: 62.16

Gene sequence:

>1065_bases
ATGAGCGAATTGCGCGCCCTGGCCGATTCCGACCGGCTTTCCGCATGGCTCGACGTGCATGTTCCCGCGCTGGGGCACGG
GCCGCTGGCGATCGGAAAAATCCATGGTGGCACCTCGAACGTCATTCTGTCGCTGGATCGCGGTGGCCGGACGCTGGTCC
TTCGCCGTCCGCCGATCGTCCCGCCGCCGGGCAGCGCGAAGAGCATCTTGCGCGAAGCGCGGGTGCTGACCGCGCTGAAC
GGCACCGATGTGCCGCATCCCGTCTGCCATGCAAGCTGCGCCGACCCGGACGTCATCGGCGCGCCCTTTTATGTCATGGA
CCGTGTCGACGGATGGTCTGGCGCCCTTTGCGACGGGCGCATTCATGACCGCCCGCCGTTCGACAAGCCTCCCCATGCCG
GCGAGATCCCGTTTGCGATGGTCGACGGGCTGATCGCGCTCGCCAATGTCGATTACCGCGCCGTCGGTCTCGACGATTTC
GGGCGGCCCGATAATTTTCTGGAGCGACAGGTCGATCGCTGGGAAAGTCAGATCATAAGCTATCGCCAACTCTATGATTT
CGAATGGCGTGAGCTGCCCGGCTATGCGCTCGCTCGCGACTGGCTTCGCGCGAACGCGCCGGACGATTTCCGGCCCGGTA
TTATCCACGGCGATGTCGGGACGCCCAATGCATTGTTTGCCTTTGACCCGCCATGCCGCCTTGCCGCGCTGATCGACTGG
GAATTGTCAACCATAGCCGACCCGCTGCTCGATCTGGCATGGTTCTGCAACGGCATCTGCGACGATCGATTTCCGGGCCA
TGTGCCTGAAAAGGCGCTGTACAATGTGGACCACTGGCCATCGCGGCAGGAATTGATGGCGCATTATGCCGTCGGCACCG
GGCGCGACATGGCGAGTTTCGATTATTATCTGGTGCTGGCGATGTTCAAGGGTGGCTGTATCCTGGAATATAAGGTCGCG
CAGGCCGCCAAGGGCATTCTAAGCGCCGAAACAGGCCACTTCTTCGACCGGCTTGTGCGCGGCAATTTTGCCGAAGCCGA
AAAGCTGATCCGACTGGTCGGCTAA

Upstream 100 bases:

>100_bases
ATATACTCGCGCGGATCGACGGGGAAATGTTCGCCGACGCGGCCGACCGGTTGCAAGAGATACGCCAGGGGATCGAAACC
TATTTGCGCGCGCGCGACCG

Downstream 100 bases:

>100_bases
CCCTGTCCCGCCGGAATAGCAGGAGCAGACATGATCAACTTTCGCATCGAACCGGACTTGCAGGCGAGGCTGGACTGGAT
GGCAGCGTTTGTCCGCCGCG

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSELRALADSDRLSAWLDVHVPALGHGPLAIGKIHGGTSNVILSLDRGGRTLVLRRPPIVPPPGSAKSILREARVLTALN
GTDVPHPVCHASCADPDVIGAPFYVMDRVDGWSGALCDGRIHDRPPFDKPPHAGEIPFAMVDGLIALANVDYRAVGLDDF
GRPDNFLERQVDRWESQIISYRQLYDFEWRELPGYALARDWLRANAPDDFRPGIIHGDVGTPNALFAFDPPCRLAALIDW
ELSTIADPLLDLAWFCNGICDDRFPGHVPEKALYNVDHWPSRQELMAHYAVGTGRDMASFDYYLVLAMFKGGCILEYKVA
QAAKGILSAETGHFFDRLVRGNFAEAEKLIRLVG

Sequences:

>Translated_354_residues
MSELRALADSDRLSAWLDVHVPALGHGPLAIGKIHGGTSNVILSLDRGGRTLVLRRPPIVPPPGSAKSILREARVLTALN
GTDVPHPVCHASCADPDVIGAPFYVMDRVDGWSGALCDGRIHDRPPFDKPPHAGEIPFAMVDGLIALANVDYRAVGLDDF
GRPDNFLERQVDRWESQIISYRQLYDFEWRELPGYALARDWLRANAPDDFRPGIIHGDVGTPNALFAFDPPCRLAALIDW
ELSTIADPLLDLAWFCNGICDDRFPGHVPEKALYNVDHWPSRQELMAHYAVGTGRDMASFDYYLVLAMFKGGCILEYKVA
QAAKGILSAETGHFFDRLVRGNFAEAEKLIRLVG
>Mature_353_residues
SELRALADSDRLSAWLDVHVPALGHGPLAIGKIHGGTSNVILSLDRGGRTLVLRRPPIVPPPGSAKSILREARVLTALNG
TDVPHPVCHASCADPDVIGAPFYVMDRVDGWSGALCDGRIHDRPPFDKPPHAGEIPFAMVDGLIALANVDYRAVGLDDFG
RPDNFLERQVDRWESQIISYRQLYDFEWRELPGYALARDWLRANAPDDFRPGIIHGDVGTPNALFAFDPPCRLAALIDWE
LSTIADPLLDLAWFCNGICDDRFPGHVPEKALYNVDHWPSRQELMAHYAVGTGRDMASFDYYLVLAMFKGGCILEYKVAQ
AAKGILSAETGHFFDRLVRGNFAEAEKLIRLVG

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48976061, Length=339, Percent_Identity=30.9734513274336, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI211971008, Length=339, Percent_Identity=30.9734513274336, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI38505218, Length=346, Percent_Identity=30.635838150289, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17562446, Length=324, Percent_Identity=28.3950617283951, Blast_Score=101, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39102; Mature: 38971

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELRALADSDRLSAWLDVHVPALGHGPLAIGKIHGGTSNVILSLDRGGRTLVLRRPPIV
CCHHHHHHCCCHHEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
PPPGSAKSILREARVLTALNGTDVPHPVCHASCADPDVIGAPFYVMDRVDGWSGALCDGR
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCEECCC
IHDRPPFDKPPHAGEIPFAMVDGLIALANVDYRAVGLDDFGRPDNFLERQVDRWESQIIS
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
YRQLYDFEWRELPGYALARDWLRANAPDDFRPGIIHGDVGTPNALFAFDPPCRLAALIDW
HHHHHCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECC
ELSTIADPLLDLAWFCNGICDDRFPGHVPEKALYNVDHWPSRQELMAHYAVGTGRDMASF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
DYYLVLAMFKGGCILEYKVAQAAKGILSAETGHFFDRLVRGNFAEAEKLIRLVG
HHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SELRALADSDRLSAWLDVHVPALGHGPLAIGKIHGGTSNVILSLDRGGRTLVLRRPPIV
CHHHHHHCCCHHEEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
PPPGSAKSILREARVLTALNGTDVPHPVCHASCADPDVIGAPFYVMDRVDGWSGALCDGR
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCEECCC
IHDRPPFDKPPHAGEIPFAMVDGLIALANVDYRAVGLDDFGRPDNFLERQVDRWESQIIS
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
YRQLYDFEWRELPGYALARDWLRANAPDDFRPGIIHGDVGTPNALFAFDPPCRLAALIDW
HHHHHCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEEECCCCCEEEEECC
ELSTIADPLLDLAWFCNGICDDRFPGHVPEKALYNVDHWPSRQELMAHYAVGTGRDMASF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHH
DYYLVLAMFKGGCILEYKVAQAAKGILSAETGHFFDRLVRGNFAEAEKLIRLVG
HHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA