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The map label for this gene is yngJ [H]

Identifier: 103486350

GI number: 103486350

Start: 867910

End: 869205

Strand: Reverse

Name: yngJ [H]

Synonym: Sala_0860

Alternate gene names: 103486350

Gene position: 869205-867910 (Counterclockwise)

Preceding gene: 103486351

Following gene: 103486349

Centisome position: 25.98

GC content: 63.19

Gene sequence:

>1296_bases
ATGATCAACTTTCGCATCGAACCGGACTTGCAGGCGAGGCTGGACTGGATGGCAGCGTTTGTCCGCCGCGAATGCGAGCC
GATGGACATGCTGTTCCCCGGTCACGGCGCTCCCTATGACGTAACCGACCGCAAGGCGCGCGCGCATCTGAAACCATTGC
AAAAGGAGGTGAAGGCGCAGGGATTGTGGGCCTGTCATCTGGGCGCCGAGCTGGGCGGACCCGGATATGGTCAACTGACG
CTGGCGCTGATGAACGAACTTCTGGGCCGCAGCTATTGGGCGCCCACCATATTCGGCACCGCCGCGCCCGATACGGGGAA
CAGCGAAATCCTGGCGATGTTCGGCACCGACGAGCAGAAGGCCCGCTACCTGAAGCCGCTGATCGACGGTGAAATCGTAT
CGACCTTTTCGATGACCGAACCGCAGGCCGGGGCCGATCCCAAGGAGTTCACCTGCCGCGCGTGGCGCGAGGGCGACGAG
TGGGTGATCGAGGGAGAGAAATGGTTCTCCTCCAATGCGCGCTTCGCCGCCTTTCTCATCGTGATGGTCGTGACCAATCC
CGAAAACCCGCCGCACGGGCGAATGTCGATGCTGATCGTGCCCGCCGATGCGCCCGGACTGGAATTCATCCGCCATTCCC
AGACGATGGGGGATCGCCGGGGCGACGACGACGGCATTCACGCCTATATCCGTTATAATCGCGTGCGGGTTCCACTGGAC
GCGATGCTGGGCAACCCCGGCGAGGGGTTCAAGGTCGCGCAGGCGCGGCTGGGCGGCGGCCGTGTCCACCACGCCATGCG
AACGGTCGGCAAATGCCAGCGCGCGATCGACATGATGCTGGAACGCGCGGTCTCACGCCACACCCAGGGCAAGCAGCTTG
GCGAACATCAGTTCGTGCAGGGAGCGATCGCCGATTCGATCATCGAGCTGGAACAGTTCCGCCTGCTGGTGCTCAAGACC
GCGTGGATCATCGATGAGGTGGAAAGCGGTCGCGAGCCCCACGGCGCCGCGCGCACGCATATCGCGATGTGCAAGGTGCA
GATGGCAAAAGTCTGTCACGACATCGTCCAGCGCGCGATCCAGATGCACGGAAGCCTGGGCATGACGCTCGAAACGCCGC
TCGCCGATATGTGGATGGGCCTTCCCGCCCTCGCCCTGGCCGACGGACCAACCGAGGTGCACAAGGTACAGGTCGCCAAA
GCTCATCTGAAGAATGCAACGCGCGCATCGGGCCTGTTTCCCAGCGAACATATACCGACGCGGCTGGCAGCGATCCGGGA
AAGGAACACGGCATGA

Upstream 100 bases:

>100_bases
CCACTTCTTCGACCGGCTTGTGCGCGGCAATTTTGCCGAAGCCGAAAAGCTGATCCGACTGGTCGGCTAACCCTGTCCCG
CCGGAATAGCAGGAGCAGAC

Downstream 100 bases:

>100_bases
CGCCCGATCCGCTGTTCGATTTCACCGGAAAGGTCGCGCTCGTCACCGGCGGGTCGCGCGGGCTTGGCTATCGGATGGTA
AAGGCGTTTGCGGAGCGCGG

Product: acyl-CoA dehydrogenase-like protein

Products: 2,3-dehydroacyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MINFRIEPDLQARLDWMAAFVRRECEPMDMLFPGHGAPYDVTDRKARAHLKPLQKEVKAQGLWACHLGAELGGPGYGQLT
LALMNELLGRSYWAPTIFGTAAPDTGNSEILAMFGTDEQKARYLKPLIDGEIVSTFSMTEPQAGADPKEFTCRAWREGDE
WVIEGEKWFSSNARFAAFLIVMVVTNPENPPHGRMSMLIVPADAPGLEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLD
AMLGNPGEGFKVAQARLGGGRVHHAMRTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQGAIADSIIELEQFRLLVLKT
AWIIDEVESGREPHGAARTHIAMCKVQMAKVCHDIVQRAIQMHGSLGMTLETPLADMWMGLPALALADGPTEVHKVQVAK
AHLKNATRASGLFPSEHIPTRLAAIRERNTA

Sequences:

>Translated_431_residues
MINFRIEPDLQARLDWMAAFVRRECEPMDMLFPGHGAPYDVTDRKARAHLKPLQKEVKAQGLWACHLGAELGGPGYGQLT
LALMNELLGRSYWAPTIFGTAAPDTGNSEILAMFGTDEQKARYLKPLIDGEIVSTFSMTEPQAGADPKEFTCRAWREGDE
WVIEGEKWFSSNARFAAFLIVMVVTNPENPPHGRMSMLIVPADAPGLEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLD
AMLGNPGEGFKVAQARLGGGRVHHAMRTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQGAIADSIIELEQFRLLVLKT
AWIIDEVESGREPHGAARTHIAMCKVQMAKVCHDIVQRAIQMHGSLGMTLETPLADMWMGLPALALADGPTEVHKVQVAK
AHLKNATRASGLFPSEHIPTRLAAIRERNTA
>Mature_431_residues
MINFRIEPDLQARLDWMAAFVRRECEPMDMLFPGHGAPYDVTDRKARAHLKPLQKEVKAQGLWACHLGAELGGPGYGQLT
LALMNELLGRSYWAPTIFGTAAPDTGNSEILAMFGTDEQKARYLKPLIDGEIVSTFSMTEPQAGADPKEFTCRAWREGDE
WVIEGEKWFSSNARFAAFLIVMVVTNPENPPHGRMSMLIVPADAPGLEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLD
AMLGNPGEGFKVAQARLGGGRVHHAMRTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQGAIADSIIELEQFRLLVLKT
AWIIDEVESGREPHGAARTHIAMCKVQMAKVCHDIVQRAIQMHGSLGMTLETPLADMWMGLPALALADGPTEVHKVQVAK
AHLKNATRASGLFPSEHIPTRLAAIRERNTA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=363, Percent_Identity=38.5674931129477, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI48976061, Length=364, Percent_Identity=39.2857142857143, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI211971008, Length=364, Percent_Identity=39.2857142857143, Blast_Score=234, Evalue=8e-62,
Organism=Homo sapiens, GI4557231, Length=389, Percent_Identity=28.5347043701799, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI187960098, Length=389, Percent_Identity=28.5347043701799, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI4557233, Length=365, Percent_Identity=28.7671232876712, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI4501859, Length=341, Percent_Identity=27.8592375366569, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI21361497, Length=359, Percent_Identity=25.3481894150418, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI7656849, Length=349, Percent_Identity=24.0687679083095, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI226958412, Length=354, Percent_Identity=24.0112994350282, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI226958414, Length=333, Percent_Identity=24.6246246246246, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI4557235, Length=392, Percent_Identity=24.4897959183673, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI76496475, Length=392, Percent_Identity=24.4897959183673, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4501857, Length=343, Percent_Identity=23.3236151603499, Blast_Score=93, Evalue=6e-19,
Organism=Escherichia coli, GI87081958, Length=293, Percent_Identity=24.5733788395904, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786223, Length=337, Percent_Identity=24.3323442136499, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=367, Percent_Identity=37.874659400545, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17534899, Length=358, Percent_Identity=29.3296089385475, Blast_Score=147, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=352, Percent_Identity=28.125, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17570075, Length=359, Percent_Identity=25.6267409470752, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17538396, Length=367, Percent_Identity=25.0681198910082, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=399, Percent_Identity=24.0601503759398, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=407, Percent_Identity=24.8157248157248, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=23.9690721649485, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=301, Percent_Identity=27.906976744186, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=348, Percent_Identity=26.4367816091954, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=342, Percent_Identity=24.5614035087719, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=265, Percent_Identity=27.1698113207547, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=255, Percent_Identity=27.4509803921569, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=256, Percent_Identity=28.125, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=237, Percent_Identity=27.0042194092827, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24660351, Length=384, Percent_Identity=30.46875, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=27.1276595744681, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646207, Length=346, Percent_Identity=26.878612716763, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24666513, Length=351, Percent_Identity=27.3504273504274, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281363737, Length=363, Percent_Identity=23.6914600550964, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355753, Length=348, Percent_Identity=27.2988505747126, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI19920834, Length=296, Percent_Identity=22.6351351351351, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.3

Molecular weight: Translated: 47794; Mature: 47794

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFRIEPDLQARLDWMAAFVRRECEPMDMLFPGHGAPYDVTDRKARAHLKPLQKEVKAQ
CCCEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
GLWACHLGAELGGPGYGQLTLALMNELLGRSYWAPTIFGTAAPDTGNSEILAMFGTDEQK
CEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCHHH
ARYLKPLIDGEIVSTFSMTEPQAGADPKEFTCRAWREGDEWVIEGEKWFSSNARFAAFLI
HHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHCCCCHHEEEEE
VMVVTNPENPPHGRMSMLIVPADAPGLEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLD
EEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECEEECCHH
AMLGNPGEGFKVAQARLGGGRVHHAMRTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQ
HHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAIADSIIELEQFRLLVLKTAWIIDEVESGREPHGAARTHIAMCKVQMAKVCHDIVQRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QMHGSLGMTLETPLADMWMGLPALALADGPTEVHKVQVAKAHLKNATRASGLFPSEHIPT
HHCCCCCCEECCCHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHH
RLAAIRERNTA
HHHHHHHCCCC
>Mature Secondary Structure
MINFRIEPDLQARLDWMAAFVRRECEPMDMLFPGHGAPYDVTDRKARAHLKPLQKEVKAQ
CCCEEECCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHC
GLWACHLGAELGGPGYGQLTLALMNELLGRSYWAPTIFGTAAPDTGNSEILAMFGTDEQK
CEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCHHH
ARYLKPLIDGEIVSTFSMTEPQAGADPKEFTCRAWREGDEWVIEGEKWFSSNARFAAFLI
HHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHCCCCHHEEEEE
VMVVTNPENPPHGRMSMLIVPADAPGLEFIRHSQTMGDRRGDDDGIHAYIRYNRVRVPLD
EEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECEEECCHH
AMLGNPGEGFKVAQARLGGGRVHHAMRTVGKCQRAIDMMLERAVSRHTQGKQLGEHQFVQ
HHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GAIADSIIELEQFRLLVLKTAWIIDEVESGREPHGAARTHIAMCKVQMAKVCHDIVQRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QMHGSLGMTLETPLADMWMGLPALALADGPTEVHKVQVAKAHLKNATRASGLFPSEHIPT
HHCCCCCCEECCCHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCHH
RLAAIRERNTA
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acceptor

Specific reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]