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The map label for this gene is mmgC [H]

Identifier: 103486344

GI number: 103486344

Start: 861664

End: 862875

Strand: Direct

Name: mmgC [H]

Synonym: Sala_0854

Alternate gene names: 103486344

Gene position: 861664-862875 (Clockwise)

Preceding gene: 103486343

Following gene: 103486345

Centisome position: 25.76

GC content: 62.05

Gene sequence:

>1212_bases
ATGGATCTGAGCTATGGCGAAGCGGCCGAAGTCTTTCGCGGCGAGGTCCGTGCCTTTCTGGCGTCGCACTGGCCCCCTGC
CAATGATCTGCGCGGTGATGATCTGAAGCAATTCGTCCGCGCATTCCGACGCCAGGCGACCGAACAAGGCTATTTGTACC
GCGCCATTCCCAAGCGTTATGGCGGGTCGGAACAGCCCGTCGATGTGATCCGCGCGCAGGTGATCCGCGAGGAGTTTCAA
CGCGCCAGAGCACCGATGGAAGTGGGCGGCAACGGAATGAACATGACCGTTCCGACCTTGCTGGAGAAGGGCACCGAGGA
ACAGCGCGAGCTGTTCGTCCGCAAGACGCTGGAAGGCGATTATATCTGGGGGCAGGGATATTCCGAACCCGGTGCCGGGT
CGGACCTTGCCAGCGTGCGGACCAGGGGCGAGCTGTCGGCGGACGGCAGCAAATGGATCATCAACGGACAGAAAATCTGG
ACCTCGCAGGGAATGCAGGCGACGCACATGTTCATGCTGGTGCGGACCGAACCGGACGCGCCCAAGCATGACGGCATCAC
TTATCTGCTCATCGACCTCGACCAGCCGGGCGTGACGCGCCGCCCGATCCGCCAGATGACGGGAGAAGCAGGCGATCACA
CGTTTTGCGAGTTTTTCTTCGACAACGCCGAAACGCCGGTGGCTTGGCAGGTCGGTGAGCGAGGGCAGGGCTGGTATGTC
AGCCGCACCACACTGAAGCATGAGCGCGCGAGCATCGGGGGCGCTGATGGCCTGGGGCGTCAGTTTGCGAAACTGGTCGA
ACTGGCAAAGGAAGTGAACCGGATCGAGGATCCGCTGGTGCGCGACAAGCTGACGCAGATCGAGGGCTTTGTTTTGTCGC
ACCGTTATTCCAGCTATCGCATTTTCAGTTGCGCGGCGGCGGGGGACGACCCCGGCCCGGTATCATTGATGATGAAACTG
CTGCTGACCGAGATCGGCCACGAAATCGCGTTGCTGGCGCAGGAATTGCTGGGTGAACATGCCTTTGTCGAACCGGTCGG
GGCGGGCGGGCGCGGTAGCCGGGGGCCGCGCGGGCCGGAAAAATGGATGGACCAGATCATGGGTAGCCTGGGCAATTCGA
TCGCGGGGGGCACATCGAATATTCAACGCAATATCATTGGCGAGCGCGGGCTGGGGCTGCCCCGCGACCTTGCGATAAGT
GCGGAGCGCTGA

Upstream 100 bases:

>100_bases
GCATCGCTGCCCCTTACAAAGCGGGCGTTTTTTGACACAACATATTTGACGTAGTTATATAACTCAGGCATATCGCATTC
GATAAGAGGGAGAGCGCGCG

Downstream 100 bases:

>100_bases
CGTGCATTTTCATCTGACCGAAGAGCAGGCCGCAATCCAGGAGGCGGTGCGGGGCACGCTGGCGGACCATTGGCCACTGG
AGCGCCTCCACGCCTTTGCC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDLSYGEAAEVFRGEVRAFLASHWPPANDLRGDDLKQFVRAFRRQATEQGYLYRAIPKRYGGSEQPVDVIRAQVIREEFQ
RARAPMEVGGNGMNMTVPTLLEKGTEEQRELFVRKTLEGDYIWGQGYSEPGAGSDLASVRTRGELSADGSKWIINGQKIW
TSQGMQATHMFMLVRTEPDAPKHDGITYLLIDLDQPGVTRRPIRQMTGEAGDHTFCEFFFDNAETPVAWQVGERGQGWYV
SRTTLKHERASIGGADGLGRQFAKLVELAKEVNRIEDPLVRDKLTQIEGFVLSHRYSSYRIFSCAAAGDDPGPVSLMMKL
LLTEIGHEIALLAQELLGEHAFVEPVGAGGRGSRGPRGPEKWMDQIMGSLGNSIAGGTSNIQRNIIGERGLGLPRDLAIS
AER

Sequences:

>Translated_403_residues
MDLSYGEAAEVFRGEVRAFLASHWPPANDLRGDDLKQFVRAFRRQATEQGYLYRAIPKRYGGSEQPVDVIRAQVIREEFQ
RARAPMEVGGNGMNMTVPTLLEKGTEEQRELFVRKTLEGDYIWGQGYSEPGAGSDLASVRTRGELSADGSKWIINGQKIW
TSQGMQATHMFMLVRTEPDAPKHDGITYLLIDLDQPGVTRRPIRQMTGEAGDHTFCEFFFDNAETPVAWQVGERGQGWYV
SRTTLKHERASIGGADGLGRQFAKLVELAKEVNRIEDPLVRDKLTQIEGFVLSHRYSSYRIFSCAAAGDDPGPVSLMMKL
LLTEIGHEIALLAQELLGEHAFVEPVGAGGRGSRGPRGPEKWMDQIMGSLGNSIAGGTSNIQRNIIGERGLGLPRDLAIS
AER
>Mature_403_residues
MDLSYGEAAEVFRGEVRAFLASHWPPANDLRGDDLKQFVRAFRRQATEQGYLYRAIPKRYGGSEQPVDVIRAQVIREEFQ
RARAPMEVGGNGMNMTVPTLLEKGTEEQRELFVRKTLEGDYIWGQGYSEPGAGSDLASVRTRGELSADGSKWIINGQKIW
TSQGMQATHMFMLVRTEPDAPKHDGITYLLIDLDQPGVTRRPIRQMTGEAGDHTFCEFFFDNAETPVAWQVGERGQGWYV
SRTTLKHERASIGGADGLGRQFAKLVELAKEVNRIEDPLVRDKLTQIEGFVLSHRYSSYRIFSCAAAGDDPGPVSLMMKL
LLTEIGHEIALLAQELLGEHAFVEPVGAGGRGSRGPRGPEKWMDQIMGSLGNSIAGGTSNIQRNIIGERGLGLPRDLAIS
AER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=247, Percent_Identity=29.9595141700405, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI226958414, Length=215, Percent_Identity=30.2325581395349, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI21361497, Length=171, Percent_Identity=33.9181286549708, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4501857, Length=340, Percent_Identity=25, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI4557233, Length=351, Percent_Identity=26.7806267806268, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI187960098, Length=157, Percent_Identity=29.9363057324841, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4557231, Length=200, Percent_Identity=26.5, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4501859, Length=238, Percent_Identity=25.6302521008403, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI76496475, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI4557235, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=253, Percent_Identity=27.6679841897233, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786223, Length=358, Percent_Identity=22.9050279329609, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=387, Percent_Identity=26.6149870801034, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17570075, Length=257, Percent_Identity=27.2373540856031, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=284, Percent_Identity=27.112676056338, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=245, Percent_Identity=27.7551020408163, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=166, Percent_Identity=31.9277108433735, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=159, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=159, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=369, Percent_Identity=25.2032520325203, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=243, Percent_Identity=28.8065843621399, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=208, Percent_Identity=26.4423076923077, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=209, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=201, Percent_Identity=27.363184079602, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355753, Length=375, Percent_Identity=25.8666666666667, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281363737, Length=183, Percent_Identity=31.1475409836066, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24660351, Length=226, Percent_Identity=29.646017699115, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24646207, Length=304, Percent_Identity=25, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21356377, Length=353, Percent_Identity=26.0623229461756, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24666513, Length=208, Percent_Identity=27.8846153846154, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44636; Mature: 44636

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSYGEAAEVFRGEVRAFLASHWPPANDLRGDDLKQFVRAFRRQATEQGYLYRAIPKRY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHC
GGSEQPVDVIRAQVIREEFQRARAPMEVGGNGMNMTVPTLLEKGTEEQRELFVRKTLEGD
CCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHCCCC
YIWGQGYSEPGAGSDLASVRTRGELSADGSKWIINGQKIWTSQGMQATHMFMLVRTEPDA
EEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCEEEEEEEEEECCCC
PKHDGITYLLIDLDQPGVTRRPIRQMTGEAGDHTFCEFFFDNAETPVAWQVGERGQGWYV
CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHEECCCCCCEEEECCCCCCCEEE
SRTTLKHERASIGGADGLGRQFAKLVELAKEVNRIEDPLVRDKLTQIEGFVLSHRYSSYR
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEE
IFSCAAAGDDPGPVSLMMKLLLTEIGHEIALLAQELLGEHAFVEPVGAGGRGSRGPRGPE
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHH
KWMDQIMGSLGNSIAGGTSNIQRNIIGERGLGLPRDLAISAER
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLSYGEAAEVFRGEVRAFLASHWPPANDLRGDDLKQFVRAFRRQATEQGYLYRAIPKRY
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHC
GGSEQPVDVIRAQVIREEFQRARAPMEVGGNGMNMTVPTLLEKGTEEQRELFVRKTLEGD
CCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEHHHHHHCCCHHHHHHHHHHHCCCC
YIWGQGYSEPGAGSDLASVRTRGELSADGSKWIINGQKIWTSQGMQATHMFMLVRTEPDA
EEECCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCEEEEEEEEEECCCC
PKHDGITYLLIDLDQPGVTRRPIRQMTGEAGDHTFCEFFFDNAETPVAWQVGERGQGWYV
CCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHEECCCCCCEEEECCCCCCCEEE
SRTTLKHERASIGGADGLGRQFAKLVELAKEVNRIEDPLVRDKLTQIEGFVLSHRYSSYR
EHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEE
IFSCAAAGDDPGPVSLMMKLLLTEIGHEIALLAQELLGEHAFVEPVGAGGRGSRGPRGPE
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHH
KWMDQIMGSLGNSIAGGTSNIQRNIIGERGLGLPRDLAISAER
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]