| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is paaG [C]
Identifier: 103486343
GI number: 103486343
Start: 860647
End: 861444
Strand: Direct
Name: paaG [C]
Synonym: Sala_0853
Alternate gene names: 103486343
Gene position: 860647-861444 (Clockwise)
Preceding gene: 103486342
Following gene: 103486344
Centisome position: 25.73
GC content: 65.04
Gene sequence:
>798_bases GTGGCTGAACCCGACCATATTCGCATCGAACGCCGCGAGCATGGAATCGCAGCCGTTGTGGTGGATCGCGCCGACATCGG CAATGCCTCCTCGCCCGAAATGCTGGGCGAAATTCGCGACGCTTTTACGGCGCTTTCGGCCGACCGGGAGGTTCGCGCGA TCATCCTCGCGGCCGAGGGAAAGCATTTTTCGGTCGGGGCCGATTTTGCCTTTCTGGGGCGCCTGACCAGCATGGCAGCG ACCGAGATCAAGGACACGGTTTACGCCAATTTCCAGGGCGCCGCGCGCGCCATCTATCGTTCGCCCAAACCGACGCTCGC CGTGGTTCAGGGCGCCGCCGTCACTGTGGGGTGCGAGCTTGCGCTCGCCTGCGATTTTCGGATCGCCGCCGACAATGCGA TGTTCCAGGAAAGCTGGATCAAGCTGGGCATCATGCCCCCGCTTGGCGGAACTTTCCTGCTGCCCCGCATCGTCGGGCTG GGCCGCGCGATGGATATGTGCCTGCGCGGTCGGCAGGTGCGCGCCGAAGAGGCCTTGGCCATCGGACTGGTCGCCGAGGT GGTGGCAAGGGACGATCTGGGGGAACGCGGCATGGCGTTGGCGCGCGAACTGGCTGCCGCCGCTCCGCTGGGCTATGCGA CGGTGAAGCAGTCGCTTCAACGCGCGCTCGAAAGCAGCATGGACGCGGAATGGCAGGCGAATCTGTCCAACCAGGCGTTG CTGCTTGGCAGCGAAGATCATCGCGAGGGGCTGGCGGCTGTAACCGAAAAGCGCGCGCCGCGTTTTCGCGGCGCATAG
Upstream 100 bases:
>100_bases TTCGAAGCCGCGCTTGATGCCGAAGCATTGAACATGGGGCTTTCGACCGGCGCAACCGCGTTGATCTGGCGCGAAAAGAA AAAGCGGGAAGAACAGGGCG
Downstream 100 bases:
>100_bases CGCCCGCGCTAGAGCGGCGTGCAACAGCATCGGCAAACCAGGGTGCGGGCAAGCCCGCCCGGTTTGACCCCCCCCTTCGG CCTCGGTGAAATAATGCGGT
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MAEPDHIRIERREHGIAAVVVDRADIGNASSPEMLGEIRDAFTALSADREVRAIILAAEGKHFSVGADFAFLGRLTSMAA TEIKDTVYANFQGAARAIYRSPKPTLAVVQGAAVTVGCELALACDFRIAADNAMFQESWIKLGIMPPLGGTFLLPRIVGL GRAMDMCLRGRQVRAEEALAIGLVAEVVARDDLGERGMALARELAAAAPLGYATVKQSLQRALESSMDAEWQANLSNQAL LLGSEDHREGLAAVTEKRAPRFRGA
Sequences:
>Translated_265_residues MAEPDHIRIERREHGIAAVVVDRADIGNASSPEMLGEIRDAFTALSADREVRAIILAAEGKHFSVGADFAFLGRLTSMAA TEIKDTVYANFQGAARAIYRSPKPTLAVVQGAAVTVGCELALACDFRIAADNAMFQESWIKLGIMPPLGGTFLLPRIVGL GRAMDMCLRGRQVRAEEALAIGLVAEVVARDDLGERGMALARELAAAAPLGYATVKQSLQRALESSMDAEWQANLSNQAL LLGSEDHREGLAAVTEKRAPRFRGA >Mature_264_residues AEPDHIRIERREHGIAAVVVDRADIGNASSPEMLGEIRDAFTALSADREVRAIILAAEGKHFSVGADFAFLGRLTSMAAT EIKDTVYANFQGAARAIYRSPKPTLAVVQGAAVTVGCELALACDFRIAADNAMFQESWIKLGIMPPLGGTFLLPRIVGLG RAMDMCLRGRQVRAEEALAIGLVAEVVARDDLGERGMALARELAAAAPLGYATVKQSLQRALESSMDAEWQANLSNQALL LGSEDHREGLAAVTEKRAPRFRGA
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=261, Percent_Identity=28.3524904214559, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI4502327, Length=272, Percent_Identity=31.25, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI31542718, Length=257, Percent_Identity=29.9610894941634, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI70995211, Length=269, Percent_Identity=25.2788104089219, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI68989263, Length=185, Percent_Identity=34.0540540540541, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI221307494, Length=228, Percent_Identity=28.0701754385965, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI221136756, Length=230, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI221136753, Length=230, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI116235487, Length=203, Percent_Identity=26.6009852216749, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI4757966, Length=205, Percent_Identity=28.2926829268293, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI51538581, Length=205, Percent_Identity=28.2926829268293, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI25453481, Length=205, Percent_Identity=28.2926829268293, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI51538573, Length=205, Percent_Identity=28.2926829268293, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4757968, Length=201, Percent_Identity=27.8606965174129, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI49355787, Length=201, Percent_Identity=27.8606965174129, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI20127408, Length=207, Percent_Identity=30.9178743961353, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI45643119, Length=181, Percent_Identity=30.939226519337, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI260275230, Length=181, Percent_Identity=30.939226519337, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI260274832, Length=181, Percent_Identity=30.939226519337, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI157694516, Length=238, Percent_Identity=26.0504201680672, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI213417737, Length=238, Percent_Identity=26.0504201680672, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI157694520, Length=211, Percent_Identity=26.5402843601896, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787660, Length=252, Percent_Identity=31.7460317460317, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787659, Length=259, Percent_Identity=32.4324324324324, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI221142681, Length=271, Percent_Identity=34.3173431734317, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1788597, Length=262, Percent_Identity=30.9160305343511, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1788682, Length=239, Percent_Identity=28.8702928870293, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790281, Length=203, Percent_Identity=30.5418719211823, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI87082183, Length=242, Percent_Identity=28.5123966942149, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25145438, Length=252, Percent_Identity=31.7460317460317, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17554946, Length=261, Percent_Identity=28.735632183908, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17560910, Length=231, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17534483, Length=273, Percent_Identity=25.6410256410256, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17536985, Length=245, Percent_Identity=26.9387755102041, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17540714, Length=237, Percent_Identity=25.7383966244726, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17558304, Length=188, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17549921, Length=250, Percent_Identity=24.4, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25144276, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17508953, Length=243, Percent_Identity=27.5720164609054, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17508951, Length=243, Percent_Identity=27.5720164609054, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17535521, Length=180, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17540306, Length=246, Percent_Identity=28.4552845528455, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25141363, Length=247, Percent_Identity=27.1255060728745, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=30, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=30, Blast_Score=128, Evalue=4e-30, Organism=Drosophila melanogaster, GI19920382, Length=258, Percent_Identity=30.2325581395349, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24653139, Length=262, Percent_Identity=28.6259541984733, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=22.6923076923077, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357171, Length=188, Percent_Identity=29.2553191489362, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI19921018, Length=211, Percent_Identity=26.0663507109005, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI19921000, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583077, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24583079, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28371; Mature: 28240
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPDHIRIERREHGIAAVVVDRADIGNASSPEMLGEIRDAFTALSADREVRAIILAAEG CCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECC KHFSVGADFAFLGRLTSMAATEIKDTVYANFQGAARAIYRSPKPTLAVVQGAAVTVGCEL CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCEEEEEEEE ALACDFRIAADNAMFQESWIKLGIMPPLGGTFLLPRIVGLGRAMDMCLRGRQVRAEEALA EEEEEEEEECCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IGLVAEVVARDDLGERGMALARELAAAAPLGYATVKQSLQRALESSMDAEWQANLSNQAL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEE LLGSEDHREGLAAVTEKRAPRFRGA EECCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEPDHIRIERREHGIAAVVVDRADIGNASSPEMLGEIRDAFTALSADREVRAIILAAEG CCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECC KHFSVGADFAFLGRLTSMAATEIKDTVYANFQGAARAIYRSPKPTLAVVQGAAVTVGCEL CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCEEEEEEEE ALACDFRIAADNAMFQESWIKLGIMPPLGGTFLLPRIVGLGRAMDMCLRGRQVRAEEALA EEEEEEEEECCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH IGLVAEVVARDDLGERGMALARELAAAAPLGYATVKQSLQRALESSMDAEWQANLSNQAL HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEE LLGSEDHREGLAAVTEKRAPRFRGA EECCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA