Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is trpG [H]

Identifier: 103486327

GI number: 103486327

Start: 842997

End: 843587

Strand: Reverse

Name: trpG [H]

Synonym: Sala_0837

Alternate gene names: 103486327

Gene position: 843587-842997 (Counterclockwise)

Preceding gene: 103486328

Following gene: 103486326

Centisome position: 25.22

GC content: 64.97

Gene sequence:

>591_bases
ATGATCCTCGTCATCGACAATTATGACAGCTTCACCTTCAATCTCGTTCATTATCTGATCGAGCTGGGGGCCGAGGTGCG
CGTCGAGCGCAACGATGCGCTCACCGCGGCGCAGGCGCTCGCAACCGGCGCCGATGCGATCCTCATCTCGCCCGGCCCCT
GCACGCCGAACGAAGCGGGGATCAGCCTCGACCTTGTCGCCGCCTGTGCCGATGCGGAACGACCGCTGCTCGGCGTCTGC
CTCGGTCATCAGGCGATCGGCCAGCATTTCGGCGGCACGGTGCAGCGCGGCCATCTGATGCACGGCAAGACCTCGCCCGT
CTGCCACGACGGCAGCGGGCTTTACGCGGGCCTCCCTTCGCCCTTTCAGGCGACGCGCTATCACAGCCTGGAGGTCGTCG
ACATTCCGCCCAGCCTGATCATCAACGCGACGAGCGACGATGGCGCGGTGATGGGCTTCCGCCATGCCGAACTGCCGATC
CATGGTGTCCAGTTCCACCCCGAAAGCATCGCGACCGAGCATGGCCATGCGATGCTCGCCAATTTCCTCCGTATCGCCGG
GATTCCCGTGCGCGAACGGCAAGCGGCATGA

Upstream 100 bases:

>100_bases
ACGCCGCGACCTGAGCCTGCCGCGCCGCGCAAAGCTGGCTTTCGCGCGGGCAAAGCTTCTATCCCTTCCCCCGTCCCCGC
AAAATCGTTAGGGCGCGCGC

Downstream 100 bases:

>100_bases
GCCGGTTCGGGCCATTTCCCGACCCTTCGGCGCTGCTCGACCATGACGAGGCGGCGCACGCCTTCGCAACGATGCTCGAT
GGCGGTGCGCGCGACGAACA

Product: glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase

Products: NA

Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC
LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI
HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA

Sequences:

>Translated_196_residues
MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC
LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI
HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA
>Mature_196_residues
MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC
LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI
HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA

Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]

COG id: COG0512

COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789760, Length=186, Percent_Identity=56.4516129032258, Blast_Score=206, Evalue=6e-55,
Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=44.4444444444444, Blast_Score=137, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6322638, Length=199, Percent_Identity=42.713567839196, Blast_Score=172, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6324361, Length=214, Percent_Identity=31.7757009345794, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006220
- InterPro:   IPR001317
- InterPro:   IPR011702
- InterPro:   IPR017926
- InterPro:   IPR000991
- InterPro:   IPR006221 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: =4.1.3.27 [H]

Molecular weight: Translated: 20785; Mature: 20785

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAG
CEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCC
ISLDLVAACADAERPLLGVCLGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPS
CEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCEECCCCEEECCCC
PFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPIHGVQFHPESIATEHGHAMLA
CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCEECEEECCHHHCCCCCHHHHH
NFLRIAGIPVRERQAA
HHHHHCCCCCHHCCCC
>Mature Secondary Structure
MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAG
CEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCC
ISLDLVAACADAERPLLGVCLGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPS
CEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCEECCCCEEECCCC
PFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPIHGVQFHPESIATEHGHAMLA
CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCEECEEECCHHHCCCCCHHHHH
NFLRIAGIPVRERQAA
HHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1896020 [H]