| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486272
Identifier: 103486272
GI number: 103486272
Start: 786695
End: 787162
Strand: Reverse
Name: 103486272
Synonym: Sala_0780
Alternate gene names: NA
Gene position: 787162-786695 (Counterclockwise)
Preceding gene: 103486273
Following gene: 103486270
Centisome position: 23.53
GC content: 65.81
Gene sequence:
>468_bases ATGAAGAAGATGCAATATCTCGCCGCCGGCCTGATCGCCGCGATGATCGTTCCGGCCGCAGCGCAGGCGCAGACCCGCGA AATCCGCGAAGACCGCCGCGAAGTGCGCGAGGAGCGGCGCGAATATCGTGATGCGCTGCGCTATGGCGACCGCGGCGACA TCCGCGAGGAACGGCGCGAATATAATGACGCGCGCCGCGACCTGCGCGACAGCCAGCGCGACTGGCGCCGCGACAAACGC TACCAGCATTACCGCGCGCCTTTCCGCTATCAGTCGTTCCGCATCGGCACGACGCTGCGCCCCGCCTATTATGCGCCCGC CTATCGCCCCGCGTGGGACAGCCGCTGGGGCGTGCCACGCGCGGGCCGCAACCTGGTCTATGTGCGCCACTATAATGACC TGTTGCTGGTCAATGTGCGCAGCGGCAAGGTGATCCGCCTCTATCGCAACCATTTCCGCTGGCGTTGA
Upstream 100 bases:
>100_bases ACGGCGCATTCCGCGTCCGTTCAAATCGAATCACCTATTCCTCCATCCGTCGTCGGGCAGATCCTGTCTCCCCCCTGACG GATTTGAAAGGAATGGCACC
Downstream 100 bases:
>100_bases GTCCCTGCGGATGACGAAGAGGGCCGGGCGGGCGACCGTCCGGCATTCTTTTTTGTCGGCGGGTTTGATGACTGCTTTGG ATTGGATTCCCAACCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKKMQYLAAGLIAAMIVPAAAQAQTREIREDRREVREERREYRDALRYGDRGDIREERREYNDARRDLRDSQRDWRRDKR YQHYRAPFRYQSFRIGTTLRPAYYAPAYRPAWDSRWGVPRAGRNLVYVRHYNDLLLVNVRSGKVIRLYRNHFRWR
Sequences:
>Translated_155_residues MKKMQYLAAGLIAAMIVPAAAQAQTREIREDRREVREERREYRDALRYGDRGDIREERREYNDARRDLRDSQRDWRRDKR YQHYRAPFRYQSFRIGTTLRPAYYAPAYRPAWDSRWGVPRAGRNLVYVRHYNDLLLVNVRSGKVIRLYRNHFRWR >Mature_155_residues MKKMQYLAAGLIAAMIVPAAAQAQTREIREDRREVREERREYRDALRYGDRGDIREERREYNDARRDLRDSQRDWRRDKR YQHYRAPFRYQSFRIGTTLRPAYYAPAYRPAWDSRWGVPRAGRNLVYVRHYNDLLLVNVRSGKVIRLYRNHFRWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19096; Mature: 19096
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMQYLAAGLIAAMIVPAAAQAQTREIREDRREVREERREYRDALRYGDRGDIREERRE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH YNDARRDLRDSQRDWRRDKRYQHYRAPFRYQSFRIGTTLRPAYYAPAYRPAWDSRWGVPR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC AGRNLVYVRHYNDLLLVNVRSGKVIRLYRNHFRWR CCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCC >Mature Secondary Structure MKKMQYLAAGLIAAMIVPAAAQAQTREIREDRREVREERREYRDALRYGDRGDIREERRE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH YNDARRDLRDSQRDWRRDKRYQHYRAPFRYQSFRIGTTLRPAYYAPAYRPAWDSRWGVPR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC AGRNLVYVRHYNDLLLVNVRSGKVIRLYRNHFRWR CCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA