Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486252

Identifier: 103486252

GI number: 103486252

Start: 768488

End: 769288

Strand: Reverse

Name: 103486252

Synonym: Sala_0760

Alternate gene names: NA

Gene position: 769288-768488 (Counterclockwise)

Preceding gene: 103486253

Following gene: 103486248

Centisome position: 23.0

GC content: 68.66

Gene sequence:

>801_bases
ATGACGACCTCTCCCGGCGCGCTCGACGCGCTGCTCGCGACGCTGCGCACCGAAGAGGGCGTGGCCAAGGCGCATATCGA
CGAAGGCTGGATGCAGGGCCGTACCGCCTATGGCGGGATCAGCTCGGCGGTCGCGCTCGCGGGCGCGATGGCGCTCCACC
CGACCGAGGCACCGCTGCGCTATGCGCAGATCAGCTTCGTCGGTCCCGTCGGCGGCGATTGTACGGTCGAGACGCGCGTG
CTGCGTCAGTCGAAATCGTCGCTGTTCATCGACGCCGGTGTGTCGAGCGACATGGGGTTCGGCACCGCGGCAGTCTTCGC
CTTCTCCCCCGACCGGCCGAGCCATGTCGACCATGACCGGCTGACGATGCCGGACGCCCCCGCCCCCGAAACGCTGGCGC
CGGTGCCCGAACATCATGCGCGCCCTGCCTTCACCCGCCATTTCGACATGCGCCCGACGACGGGGCCGCGCTTTGGGTGG
AAAAGCGATGTGGGCGAATATCTGACCTGGGTGCGCTTCGCCCAGGAACCGCAATGCCACCCCACGGTCGCGCTGCTCGC
CATGGGCGACGCACTGCCCCCCGCGGCGATGGCGCTGTTCAGCCAGTTCGGGCCGATCAGCTCGATGAACTGGACGGTCA
ACATGCTGACTGCCGCGCCCGCTACCGATGACGGCTGGTGGCTGCTCTCGGCGAAGACCGGCTATGCGCGCCACGGCCTG
TCGGTGCAGGACATGATGCTGTGGAACCGCGCGGGCCAGCCGATCCTCAGCGGCAGCCAGGCGATCGCGATCTACGTCTG
A

Upstream 100 bases:

>100_bases
GGCGGCGTATGGACGCCGGGCGCGCTGCTTGGCCAGGCGCTGATCGACCGGCTGACTGCCAACGCCGGACTGACCTTTCA
GATCGAGGAATGACAACAGA

Downstream 100 bases:

>100_bases
TTGGGGACGATTGGGGACGTCCGGCTTTGCGACGCCATTTGCATCGAGTGGGAAGGTTCAAAGGCGGTCAAAGTGGTTCT
CTTCCCTTCAGGGGCGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: TesB-Like Acyl-CoA Thioesterase; TesB Family Acyl-CoA Thioesterase; Acyl-CoA Thioesterase; Thioesterase Superfamily Protein; Acyl-CoA Thioesterase TesB Family Protein; Acyl-CoA Thioesterase-Like Protein; Thioesterase-Like Protein

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRV
LRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGW
KSDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL
SVQDMMLWNRAGQPILSGSQAIAIYV

Sequences:

>Translated_266_residues
MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRV
LRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGW
KSDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL
SVQDMMLWNRAGQPILSGSQAIAIYV
>Mature_265_residues
TTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRVL
RQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWK
SDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGLS
VQDMMLWNRAGQPILSGSQAIAIYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28494; Mature: 28362

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLR
CCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
YAQISFVGPVGGDCTVETRVLRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDR
EEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC
LTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWKSDVGEYLTWVRFAQEPQCH
CCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL
CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHCCC
SVQDMMLWNRAGQPILSGSQAIAIYV
CHHHHHHHHHCCCCEECCCCEEEEEC
>Mature Secondary Structure 
TTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLR
CCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
YAQISFVGPVGGDCTVETRVLRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDR
EEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC
LTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWKSDVGEYLTWVRFAQEPQCH
CCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL
CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHCCC
SVQDMMLWNRAGQPILSGSQAIAIYV
CHHHHHHHHHCCCCEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA