| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486223
Identifier: 103486223
GI number: 103486223
Start: 736267
End: 736905
Strand: Direct
Name: 103486223
Synonym: Sala_0730
Alternate gene names: NA
Gene position: 736267-736905 (Clockwise)
Preceding gene: 103486222
Following gene: 103486228
Centisome position: 22.01
GC content: 69.33
Gene sequence:
>639_bases ATGGGCTTTCTCCTTTCGGCGGCCAGCATAGCATGGCGGCGCGAGTCGGGGCCAACCGTCCATCGCGCATCGGGCAGGGC CGGTCGCACACAGAGGGTGGCGCGACGGGCCGCCCGCCCTTATCCTGCGCCGATGACCGGAGGGGCGAGCAGAAAAATTG TCATCGGCCGGCTGAAGGCCAAGCCGTTGCTGGCGGGGCAATTGCTGTGCGCGATCGCGGCCGCGGCGCTGTTCGTGCGG CAGGTGAGCGTCGCCTGGGGCGACGGCGCGGGCGTGGTGCTGCGGATGCTGCTGTTCGGCGATCTGCTGCTGAGCGCGGG AATTGTGCTCGCACTGTTCGGCTTCGCCGCCTTTTTTCGTGCGTGGCGACGGCGCGATGCCTTCATCTGGCACGACGGCG CGCGGCTGTATCGTGGTCCGTCGGAAAGCTGGCCGCTGCCGCTGATCCGCGATGTGGTGGTATCGAAGGGCGAACTCGGC ATCGCATCGTTGCGGCTGGTCGTCGACGACGACAGCGAGGTGACGCGCGAGCTGGTGAAGCTGTACCTGCTCGCGGACGC GCCCGAGGCGGTGCGCGGCGGGGTGATGTTCGCGGTGGCGGGCGTGCGCGGGTTTCCGGCGGGGTCGGCGCTGAACTGA
Upstream 100 bases:
>100_bases GCGGCGGCGCGCTTCGGTCCAGTCGCGTTCGGGATGCGCCTGAATCTGGTTCAGGAGCACGCGCACCTCCTTGCGGCGGT CGCCTTCGGTTACGGCCTGC
Downstream 100 bases:
>100_bases GCCGGCGGCGGCGCGTCCGGGGTGTCAAAGGTCAGTAAAGGTCAGCCCCGCGGCGGCCCCCTTTTCTCCAAAGGTCACTA AATATCAGCCCTGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVR QVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELG IASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN
Sequences:
>Translated_212_residues MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVR QVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELG IASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN >Mature_211_residues GFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVRQ VSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGI ASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22691; Mature: 22560
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKA CCCCHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC KPLLAGQLLCAIAAAALFVRQVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGIASLRLVVDDDSEVTRELVK HHHHCCCEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHH LYLLADAPEAVRGGVMFAVAGVRGFPAGSALN HHHHCCCCHHHHCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure GFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKA CCCHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC KPLLAGQLLCAIAAAALFVRQVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGIASLRLVVDDDSEVTRELVK HHHHCCCEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHH LYLLADAPEAVRGGVMFAVAGVRGFPAGSALN HHHHCCCCHHHHCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA