Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486223

Identifier: 103486223

GI number: 103486223

Start: 736267

End: 736905

Strand: Direct

Name: 103486223

Synonym: Sala_0730

Alternate gene names: NA

Gene position: 736267-736905 (Clockwise)

Preceding gene: 103486222

Following gene: 103486228

Centisome position: 22.01

GC content: 69.33

Gene sequence:

>639_bases
ATGGGCTTTCTCCTTTCGGCGGCCAGCATAGCATGGCGGCGCGAGTCGGGGCCAACCGTCCATCGCGCATCGGGCAGGGC
CGGTCGCACACAGAGGGTGGCGCGACGGGCCGCCCGCCCTTATCCTGCGCCGATGACCGGAGGGGCGAGCAGAAAAATTG
TCATCGGCCGGCTGAAGGCCAAGCCGTTGCTGGCGGGGCAATTGCTGTGCGCGATCGCGGCCGCGGCGCTGTTCGTGCGG
CAGGTGAGCGTCGCCTGGGGCGACGGCGCGGGCGTGGTGCTGCGGATGCTGCTGTTCGGCGATCTGCTGCTGAGCGCGGG
AATTGTGCTCGCACTGTTCGGCTTCGCCGCCTTTTTTCGTGCGTGGCGACGGCGCGATGCCTTCATCTGGCACGACGGCG
CGCGGCTGTATCGTGGTCCGTCGGAAAGCTGGCCGCTGCCGCTGATCCGCGATGTGGTGGTATCGAAGGGCGAACTCGGC
ATCGCATCGTTGCGGCTGGTCGTCGACGACGACAGCGAGGTGACGCGCGAGCTGGTGAAGCTGTACCTGCTCGCGGACGC
GCCCGAGGCGGTGCGCGGCGGGGTGATGTTCGCGGTGGCGGGCGTGCGCGGGTTTCCGGCGGGGTCGGCGCTGAACTGA

Upstream 100 bases:

>100_bases
GCGGCGGCGCGCTTCGGTCCAGTCGCGTTCGGGATGCGCCTGAATCTGGTTCAGGAGCACGCGCACCTCCTTGCGGCGGT
CGCCTTCGGTTACGGCCTGC

Downstream 100 bases:

>100_bases
GCCGGCGGCGGCGCGTCCGGGGTGTCAAAGGTCAGTAAAGGTCAGCCCCGCGGCGGCCCCCTTTTCTCCAAAGGTCACTA
AATATCAGCCCTGCGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVR
QVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELG
IASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN

Sequences:

>Translated_212_residues
MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVR
QVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELG
IASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN
>Mature_211_residues
GFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKAKPLLAGQLLCAIAAAALFVRQ
VSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFRAWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGI
ASLRLVVDDDSEVTRELVKLYLLADAPEAVRGGVMFAVAGVRGFPAGSALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22691; Mature: 22560

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKA
CCCCHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
KPLLAGQLLCAIAAAALFVRQVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGIASLRLVVDDDSEVTRELVK
HHHHCCCEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHH
LYLLADAPEAVRGGVMFAVAGVRGFPAGSALN
HHHHCCCCHHHHCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GFLLSAASIAWRRESGPTVHRASGRAGRTQRVARRAARPYPAPMTGGASRKIVIGRLKA
CCCHHHHHHHEECCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCC
KPLLAGQLLCAIAAAALFVRQVSVAWGDGAGVVLRMLLFGDLLLSAGIVLALFGFAAFFR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWRRRDAFIWHDGARLYRGPSESWPLPLIRDVVVSKGELGIASLRLVVDDDSEVTRELVK
HHHHCCCEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHH
LYLLADAPEAVRGGVMFAVAGVRGFPAGSALN
HHHHCCCCHHHHCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA