| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103486212
Identifier: 103486212
GI number: 103486212
Start: 725757
End: 726158
Strand: Direct
Name: 103486212
Synonym: Sala_0719
Alternate gene names: NA
Gene position: 725757-726158 (Clockwise)
Preceding gene: 103486210
Following gene: 103486217
Centisome position: 21.7
GC content: 59.95
Gene sequence:
>402_bases ATGGCAAATCTGGACTGGATCGCAATCATCGTCGCGGCGGCGGCGGGTTTTGTCGTCGGCGGCATCTGGTACGGGCCGCT ATTCGGCAAGGCGTGGATGAAGGAACATGGTTTTACCGAGGAGGATTTGAAGCAGGGCAATTTCGCGCTGATCTATGGCG CGACCTTTTTGCTCAGCATCGTGTCGGCGATCTTTCTGGGGCATTTGCTCGCGCATTTCGGCGCGATGAGCGCGCGCTCG ACGATGATGATTTCGGTCGGCGTCGCGCTCGGCTTTATCGTCCCGGCAGTCGGCACCAACTATCTGTTCAGCCGCGCGAG CGGCAAGCTGTTCGCGATCGACGCAGGATATTGGCTGCTCTTCTATGCGGCGATGGGCGCGGTGTTCGTCCTCCTCGGCT GA
Upstream 100 bases:
>100_bases GAATCTTGGTTGTCATGATCGGCGGCGCGCATAGTCGATTTCGCGCCACTTGTCACGCGCGGCGAGACGGAGCATGTTGC GTGGCAAAAGGGGAGGACAA
Downstream 100 bases:
>100_bases TCGTTCCGCCCGGCGGCTTCAACCGGCGGAAGCCGCCGCCTCATCGTCTTCGCAGCGGACGACTTCGACGATCAGGTCGC CATGTTCAAGCCGCTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MANLDWIAIIVAAAAGFVVGGIWYGPLFGKAWMKEHGFTEEDLKQGNFALIYGATFLLSIVSAIFLGHLLAHFGAMSARS TMMISVGVALGFIVPAVGTNYLFSRASGKLFAIDAGYWLLFYAAMGAVFVLLG
Sequences:
>Translated_133_residues MANLDWIAIIVAAAAGFVVGGIWYGPLFGKAWMKEHGFTEEDLKQGNFALIYGATFLLSIVSAIFLGHLLAHFGAMSARS TMMISVGVALGFIVPAVGTNYLFSRASGKLFAIDAGYWLLFYAAMGAVFVLLG >Mature_132_residues ANLDWIAIIVAAAAGFVVGGIWYGPLFGKAWMKEHGFTEEDLKQGNFALIYGATFLLSIVSAIFLGHLLAHFGAMSARST MMISVGVALGFIVPAVGTNYLFSRASGKLFAIDAGYWLLFYAAMGAVFVLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14176; Mature: 14045
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLDWIAIIVAAAAGFVVGGIWYGPLFGKAWMKEHGFTEEDLKQGNFALIYGATFLLSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHH VSAIFLGHLLAHFGAMSARSTMMISVGVALGFIVPAVGTNYLFSRASGKLFAIDAGYWLL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECHHHHH FYAAMGAVFVLLG HHHHHHHHHHHCC >Mature Secondary Structure ANLDWIAIIVAAAAGFVVGGIWYGPLFGKAWMKEHGFTEEDLKQGNFALIYGATFLLSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHH VSAIFLGHLLAHFGAMSARSTMMISVGVALGFIVPAVGTNYLFSRASGKLFAIDAGYWLL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECHHHHH FYAAMGAVFVLLG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA