| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is pit [H]
Identifier: 103486210
GI number: 103486210
Start: 723152
End: 724165
Strand: Direct
Name: pit [H]
Synonym: Sala_0717
Alternate gene names: 103486210
Gene position: 723152-724165 (Clockwise)
Preceding gene: 103486209
Following gene: 103486212
Centisome position: 21.62
GC content: 64.69
Gene sequence:
>1014_bases ATGCACGAACTCGCTTTCCCGCTCCTCGTCGGCCTCGTCATCCTTGCGCTGGCGTTCGATTTCCTGAACGGGCTGCACGA CGCGGCGAACAGCATCGCGACGGTTGTCGCGACGCGATTGCTGCGCCCGGTTCAGGCGGTGGTGTTCGCGGCTTTCTTCA ACTTCGCCGCCTATTTCCTGAGCCTCGCCTTTCCGGCGCTGCACAAGGTTGCCGAGACGATCGGGGCGGGGTTGATCGAC AAGGATCTGGTCACTCCCGCGGTCGTGTTCGGCGCGCTGGTCGGCGCGATGGTCTGGAACGTCGTGACCTGGCTGAAGGG CATTCCATCCTCGTCGAGCCATGCGCTGGTGGGCGGCATCGTCGGCGCAGGCGTCGCCCATGCGGGGTTCGAGGGTATCC AGTGGAGCGGGCTCAACAAGACGGTCATTGCGATCTTCCTGTCGCCGATGCTCGGCATGTTCCTCGCGATGCTGGTGATG CTGGCGAGCAGCTGGGCGCTGCACCGCGCGACCGCGAAATTCGCCGAATCGAGCTTTCGCACGCTCCACCTCTTTTCGTC CGCCGCCTATTCGCTGAGCCACGGGCTCAACGATGCGCAAAAGACGATGGGGATCATCGCGGTGCTGCTCTATTCGACCG GTTATCTGTCGGGCGAGTTCCATGTGCCGCACTGGGTCGCGTTCGCCTGCTATATCGCGATCGCGCTCGGCACGCTGTCG GGCGGGTGGAAGATCATCGAGACGATGGGCGGCCGCATCACCAAATTGTCGCACCATCAGGGCTTCGCCGCCTCGACGGG CGGGTCGATCATGGTGTTCACCGCCAGCCTGCTCGGCATCCCGGTATCGACGACGCACACGATTACCGGCAGCATCATCG GCGCCGGCGTCGCGCGGCGGACGAGCGCGGTGCGCTGGGGCGTGGCGGGCAATGTCATCGCGGCCTGGTTTATCACCATT CCCGCAAGTGCAGCGGTGGCGGCGGTCTTCTATGCGCTGACGCGGCTGTTCTGA
Upstream 100 bases:
>100_bases GAAGCCGGAAGTCGAGATGCCCATCCGCATGGCGCTGGCCAGAAGGGTGTCTCGACTTCGCTCGACACGAGCGGGTTTCT GCGGTCGGGAAGATAGGTCC
Downstream 100 bases:
>100_bases GCGACTGCAGGCCAAACAAAAATGGCTTGATTATCAGAACTTCACTCTGAACTCGCTGTATCGTGGAGCGTGCAGGCGCC ATTCCACAGGGCTATGCGAC
Product: phosphate transporter
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MHELAFPLLVGLVILALAFDFLNGLHDAANSIATVVATRLLRPVQAVVFAAFFNFAAYFLSLAFPALHKVAETIGAGLID KDLVTPAVVFGALVGAMVWNVVTWLKGIPSSSSHALVGGIVGAGVAHAGFEGIQWSGLNKTVIAIFLSPMLGMFLAMLVM LASSWALHRATAKFAESSFRTLHLFSSAAYSLSHGLNDAQKTMGIIAVLLYSTGYLSGEFHVPHWVAFACYIAIALGTLS GGWKIIETMGGRITKLSHHQGFAASTGGSIMVFTASLLGIPVSTTHTITGSIIGAGVARRTSAVRWGVAGNVIAAWFITI PASAAVAAVFYALTRLF
Sequences:
>Translated_337_residues MHELAFPLLVGLVILALAFDFLNGLHDAANSIATVVATRLLRPVQAVVFAAFFNFAAYFLSLAFPALHKVAETIGAGLID KDLVTPAVVFGALVGAMVWNVVTWLKGIPSSSSHALVGGIVGAGVAHAGFEGIQWSGLNKTVIAIFLSPMLGMFLAMLVM LASSWALHRATAKFAESSFRTLHLFSSAAYSLSHGLNDAQKTMGIIAVLLYSTGYLSGEFHVPHWVAFACYIAIALGTLS GGWKIIETMGGRITKLSHHQGFAASTGGSIMVFTASLLGIPVSTTHTITGSIIGAGVARRTSAVRWGVAGNVIAAWFITI PASAAVAAVFYALTRLF >Mature_337_residues MHELAFPLLVGLVILALAFDFLNGLHDAANSIATVVATRLLRPVQAVVFAAFFNFAAYFLSLAFPALHKVAETIGAGLID KDLVTPAVVFGALVGAMVWNVVTWLKGIPSSSSHALVGGIVGAGVAHAGFEGIQWSGLNKTVIAIFLSPMLGMFLAMLVM LASSWALHRATAKFAESSFRTLHLFSSAAYSLSHGLNDAQKTMGIIAVLLYSTGYLSGEFHVPHWVAFACYIAIALGTLS GGWKIIETMGGRITKLSHHQGFAASTGGSIMVFTASLLGIPVSTTHTITGSIIGAGVARRTSAVRWGVAGNVIAAWFITI PASAAVAAVFYALTRLF
Specific function: Low-affinity inorganic phosphate transport (Probable) [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family. Pit subfamily [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=159, Percent_Identity=32.0754716981132, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI5803173, Length=157, Percent_Identity=32.484076433121, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1789360, Length=225, Percent_Identity=30.6666666666667, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789907, Length=225, Percent_Identity=32.4444444444444, Blast_Score=96, Evalue=4e-21, Organism=Caenorhabditis elegans, GI25146401, Length=162, Percent_Identity=28.3950617283951, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71981576, Length=162, Percent_Identity=26.5432098765432, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17536725, Length=179, Percent_Identity=27.9329608938547, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17539280, Length=163, Percent_Identity=27.6073619631902, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319773, Length=157, Percent_Identity=26.7515923566879, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI21356511, Length=177, Percent_Identity=27.1186440677966, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 35333; Mature: 35333
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELAFPLLVGLVILALAFDFLNGLHDAANSIATVVATRLLRPVQAVVFAAFFNFAAYFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAFPALHKVAETIGAGLIDKDLVTPAVVFGALVGAMVWNVVTWLKGIPSSSSHALVGGI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VGAGVAHAGFEGIQWSGLNKTVIAIFLSPMLGMFLAMLVMLASSWALHRATAKFAESSFR HHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TLHLFSSAAYSLSHGLNDAQKTMGIIAVLLYSTGYLSGEFHVPHWVAFACYIAIALGTLS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GGWKIIETMGGRITKLSHHQGFAASTGGSIMVFTASLLGIPVSTTHTITGSIIGAGVARR CCHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH TSAVRWGVAGNVIAAWFITIPASAAVAAVFYALTRLF HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MHELAFPLLVGLVILALAFDFLNGLHDAANSIATVVATRLLRPVQAVVFAAFFNFAAYFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAFPALHKVAETIGAGLIDKDLVTPAVVFGALVGAMVWNVVTWLKGIPSSSSHALVGGI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VGAGVAHAGFEGIQWSGLNKTVIAIFLSPMLGMFLAMLVMLASSWALHRATAKFAESSFR HHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TLHLFSSAAYSLSHGLNDAQKTMGIIAVLLYSTGYLSGEFHVPHWVAFACYIAIALGTLS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC GGWKIIETMGGRITKLSHHQGFAASTGGSIMVFTASLLGIPVSTTHTITGSIIGAGVARR CCHHHHHHCCCCCEEECCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHH TSAVRWGVAGNVIAAWFITIPASAAVAAVFYALTRLF HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9696772; 11481430 [H]