| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ethA [H]
Identifier: 103486208
GI number: 103486208
Start: 720136
End: 721647
Strand: Reverse
Name: ethA [H]
Synonym: Sala_0715
Alternate gene names: 103486208
Gene position: 721647-720136 (Counterclockwise)
Preceding gene: 103486211
Following gene: 103486206
Centisome position: 21.57
GC content: 61.51
Gene sequence:
>1512_bases ATGATGGCGAACACGGCGAGTCCCGTGGATCAGGATGTGCTGATCGTCGGCGCAGGCATTTCGGGGATCGGCATGGCGGT CCATCTTCAGATGCATTGCCCCGACCGCAGCTTCGCACTCGTCGAGCGCCGCGCGCAGCTCGGCGGCACCTGGGATCTGT TCCGCTACCCCGGCATCCGGTCGGACAGCGACATGCATACGCTGGGCTTCATCTTCGAACCGTGGAAGCATGAAAAGTCG ATCGCCGACGGTCCAGCGATCCTCGAATATCTCAATCGCATCGTCGACGAGCGCCACATCCGCGAACACATCCGCTTCGA CCGCAAGGTCGTTGGCGCCGATTGGGACAGCGCCGCCGCGTGCTGGACGGTGACGATGGAGGACGGCGAGGGCCGGACCT CGACGACGACCGCGCGCTGGCTCTACCTCGGCGCGGGCTATTATGATTATGACGAGCCGTTCGACGCCAATTTCGCGGGG CGCGAGGATTTCAAGGGCCGGATCGTTCATCCGCAATTCTGGCCCAAGGATCTCGATTACAAGGACAAAAGGGTCGTCGT GATCGGATCGGGCGCCACCGCAGTTACCATCGTGCCCTCGATGCAGGAGGCCGCGCATGTCACGATGCTCCAGCGCACGC CGACCTGGTATTTCATCCGCCCCGCGAAGGACGGTTTGGCCAATTTCCTGCGCAAGATCCTGCCTGAAAAGCTGGCGTAC AAGATCACGCGCTACAAGAATGTCCGGCTTCAGGACATCGCCTTCCGCCGCGCGCGCGAAAAGCCCGAGAAGGTCAAGGA GTTCCTGACCAGAAAACTGAAGGCCAGCCTGGGCGACCATTATGACGCGGAGGCCTTCACTCCGCCTTACAACCCGTGGG AGCAGCGGCTCTGCCTCGTCCCTGACGCTGATTTCTTCGAGGCGATGAAGGCGGGCAAGGCGTCGGTCGTTACCGATCAT GTCGAGCGGTTCGACGCGACGGGCATCCAGCTCAAATCGGGCAAACATCTCGACGCCGACATCATCATCACCGCGACCGG ATTGAAGCTGGCGGTGGCGGGCAAGATTCCGGTGCGCATCGACGGCGAGCGCGTCGATTGGCACGAGCATTTCTATTACA AGGCGTGCATGTTCTCGAACGTCCCGAACTTCTCGGCGGTGTTCGGCTATCTCAACGCCAGCTGGACGCTGCGCGCCGAC ATCGTGTCCGAATATGTGTGCCGCGTGCTCAATCATATGAAGGCGACGAACACGCTGGTCGCGACCCCCGTGCTTGCCGA TCCGTCGAGCCTGGAGGAAGAAAATGTCTTCGATTTCTCGTCGGGCTATATCCAGCGGTCGCTGCACATCATGCCCAAAA GCACGGCGTCGCTGCCGTGGCGGCTCAGCCAGAATTATGTGCAGGATCGCATCGACATGCGCACCGGCGCGATCGACGAC GGCATATTGACCTTCACCAATGCGAAGGCAAAGGCCCCGGCCGCGCCAACCGAACTCGAAGCCGCCGAGTGA
Upstream 100 bases:
>100_bases CCGAGCCGCACCAACTCGTCGCAGTTTCCGTAAACGTCAATTCGATTGCAAAATGCAACGCGGTGCGTAAGCTGCCCGCA TAAGACGACTGGGAGATGAC
Downstream 100 bases:
>100_bases GGGTCAATCGACGTGATCGGGCTTGCCTTTGGTCGAGCCCCTGGCGAAATCTTCGAGCTGTTTTTCGGTCATGCTTTCGG CCATTTCTTTCGATGCGCCT
Product: monooxygenase flavin-binding family protein
Products: NA
Alternate protein names: Baeyer-Villiger monooxygenase; BVMO [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MMANTASPVDQDVLIVGAGISGIGMAVHLQMHCPDRSFALVERRAQLGGTWDLFRYPGIRSDSDMHTLGFIFEPWKHEKS IADGPAILEYLNRIVDERHIREHIRFDRKVVGADWDSAAACWTVTMEDGEGRTSTTTARWLYLGAGYYDYDEPFDANFAG REDFKGRIVHPQFWPKDLDYKDKRVVVIGSGATAVTIVPSMQEAAHVTMLQRTPTWYFIRPAKDGLANFLRKILPEKLAY KITRYKNVRLQDIAFRRAREKPEKVKEFLTRKLKASLGDHYDAEAFTPPYNPWEQRLCLVPDADFFEAMKAGKASVVTDH VERFDATGIQLKSGKHLDADIIITATGLKLAVAGKIPVRIDGERVDWHEHFYYKACMFSNVPNFSAVFGYLNASWTLRAD IVSEYVCRVLNHMKATNTLVATPVLADPSSLEEENVFDFSSGYIQRSLHIMPKSTASLPWRLSQNYVQDRIDMRTGAIDD GILTFTNAKAKAPAAPTELEAAE
Sequences:
>Translated_503_residues MMANTASPVDQDVLIVGAGISGIGMAVHLQMHCPDRSFALVERRAQLGGTWDLFRYPGIRSDSDMHTLGFIFEPWKHEKS IADGPAILEYLNRIVDERHIREHIRFDRKVVGADWDSAAACWTVTMEDGEGRTSTTTARWLYLGAGYYDYDEPFDANFAG REDFKGRIVHPQFWPKDLDYKDKRVVVIGSGATAVTIVPSMQEAAHVTMLQRTPTWYFIRPAKDGLANFLRKILPEKLAY KITRYKNVRLQDIAFRRAREKPEKVKEFLTRKLKASLGDHYDAEAFTPPYNPWEQRLCLVPDADFFEAMKAGKASVVTDH VERFDATGIQLKSGKHLDADIIITATGLKLAVAGKIPVRIDGERVDWHEHFYYKACMFSNVPNFSAVFGYLNASWTLRAD IVSEYVCRVLNHMKATNTLVATPVLADPSSLEEENVFDFSSGYIQRSLHIMPKSTASLPWRLSQNYVQDRIDMRTGAIDD GILTFTNAKAKAPAAPTELEAAE >Mature_503_residues MMANTASPVDQDVLIVGAGISGIGMAVHLQMHCPDRSFALVERRAQLGGTWDLFRYPGIRSDSDMHTLGFIFEPWKHEKS IADGPAILEYLNRIVDERHIREHIRFDRKVVGADWDSAAACWTVTMEDGEGRTSTTTARWLYLGAGYYDYDEPFDANFAG REDFKGRIVHPQFWPKDLDYKDKRVVVIGSGATAVTIVPSMQEAAHVTMLQRTPTWYFIRPAKDGLANFLRKILPEKLAY KITRYKNVRLQDIAFRRAREKPEKVKEFLTRKLKASLGDHYDAEAFTPPYNPWEQRLCLVPDADFFEAMKAGKASVVTDH VERFDATGIQLKSGKHLDADIIITATGLKLAVAGKIPVRIDGERVDWHEHFYYKACMFSNVPNFSAVFGYLNASWTLRAD IVSEYVCRVLNHMKATNTLVATPVLADPSSLEEENVFDFSSGYIQRSLHIMPKSTASLPWRLSQNYVQDRIDMRTGAIDD GILTFTNAKAKAPAAPTELEAAE
Specific function: Catalyzes the activation of thiocarbamide-containing drugs such as ethionamide (ETH), isoxyl (ISO) and thiacetazone (TAC) into reactive species [H]
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI25150462, Length=228, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17555726, Length=269, Percent_Identity=22.6765799256506, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR020946 [H]
Pfam domain/function: PF01266 DAO; PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 56793; Mature: 56793
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMANTASPVDQDVLIVGAGISGIGMAVHLQMHCPDRSFALVERRAQLGGTWDLFRYPGIR CCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEHHCCCCCC SDSDMHTLGFIFEPWKHEKSIADGPAILEYLNRIVDERHIREHIRFDRKVVGADWDSAAA CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCE CWTVTMEDGEGRTSTTTARWLYLGAGYYDYDEPFDANFAGREDFKGRIVHPQFWPKDLDY EEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC KDKRVVVIGSGATAVTIVPSMQEAAHVTMLQRTPTWYFIRPAKDGLANFLRKILPEKLAY CCCEEEEEECCCEEEEEECCHHHHHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHH KITRYKNVRLQDIAFRRAREKPEKVKEFLTRKLKASLGDHYDAEAFTPPYNPWEQRLCLV HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEC PDADFFEAMKAGKASVVTDHVERFDATGIQLKSGKHLDADIIITATGLKLAVAGKIPVRI CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCEEEEEECCCEEEE DGERVDWHEHFYYKACMFSNVPNFSAVFGYLNASWTLRADIVSEYVCRVLNHMKATNTLV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEE ATPVLADPSSLEEENVFDFSSGYIQRSLHIMPKSTASLPWRLSQNYVQDRIDMRTGAIDD ECCEECCCCCCCCCCCEECCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GILTFTNAKAKAPAAPTELEAAE CEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MMANTASPVDQDVLIVGAGISGIGMAVHLQMHCPDRSFALVERRAQLGGTWDLFRYPGIR CCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEHHCCCCCC SDSDMHTLGFIFEPWKHEKSIADGPAILEYLNRIVDERHIREHIRFDRKVVGADWDSAAA CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCE CWTVTMEDGEGRTSTTTARWLYLGAGYYDYDEPFDANFAGREDFKGRIVHPQFWPKDLDY EEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC KDKRVVVIGSGATAVTIVPSMQEAAHVTMLQRTPTWYFIRPAKDGLANFLRKILPEKLAY CCCEEEEEECCCEEEEEECCHHHHHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHH KITRYKNVRLQDIAFRRAREKPEKVKEFLTRKLKASLGDHYDAEAFTPPYNPWEQRLCLV HHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCEEEC PDADFFEAMKAGKASVVTDHVERFDATGIQLKSGKHLDADIIITATGLKLAVAGKIPVRI CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCEEEEEECCCEEEE DGERVDWHEHFYYKACMFSNVPNFSAVFGYLNASWTLRADIVSEYVCRVLNHMKATNTLV CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCEE ATPVLADPSSLEEENVFDFSSGYIQRSLHIMPKSTASLPWRLSQNYVQDRIDMRTGAIDD ECCEECCCCCCCCCCCEECCCCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GILTFTNAKAKAPAAPTELEAAE CEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]