Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486207

Identifier: 103486207

GI number: 103486207

Start: 719077

End: 719916

Strand: Direct

Name: 103486207

Synonym: Sala_0714

Alternate gene names: NA

Gene position: 719077-719916 (Clockwise)

Preceding gene: 103486203

Following gene: 103486209

Centisome position: 21.5

GC content: 66.31

Gene sequence:

>840_bases
ATGACGAACAAAAGACCCTGGCGAAACGCCGTTTCGTTGCTTGCCGGTGCGCTGTTGCTGGCGGGCTGTTCCGAAGACCG
GCCGACACAGGTGGAAAAGATGGTGGCCGCCGCCGTCCCCGGCGCGCCGCCCACCGCCGCCGCCGACGAAGCGGCCAAAA
ATGCTTCGGCATCGAAGGTCAGCGAAAGCAGCGACTTGATCGAGTTCACCTATAGCTATCCCGCCGACGCCGCGCGGATT
CCCGAACTCGCCGAGGCATTGGACAGCGATCGCGCCGCGAAGCGCGCGGCGCTCATCGCAGCGGCGGAGCGCGCCAAGGC
CGCGGCCGAAAAGAACGACCATCCCTATCGCCCGCACAGCCATCGCCAGACCTGGCAGCGCGTCACCAACACGCCGCGCT
TTCTCAGCCTGTCGGCGGAGATCGATACCTATACGGGTGGCGCACACGGGATGGAGGTGTTCGACACGCTGCTGTGGGAC
CGGGGCCGCCGCAAGCGGATGAAACCGCTCGACCTGTTCGAGAGCAGCGCCGCCTTCGACGCCGCAGTCCGTGAGGCCTT
CTGCGCGGGGATCAAGCGTGCGAAAGCCGCGAAGGGCATCGCGGCGGCGGAGGCGCCCGACAGCCCCTTTGCCAAATGCC
CGCCGGCGTCGGCGCAGACGGTGTGGATCGGCTCGTCCGACGGGCGCTATCTCGACCGCCTGACGATCGCGATCGCTCCT
TATGAAGTCGGCCCCTATGCCGAGGGCAGCTATCGGATCAACGTGCCGATCACCGGCGCGGTCGCGAAGGTCGTGAAGGA
CGAGTTTGCGCGCAATATCATGCCGATAAACCAACCCTAG

Upstream 100 bases:

>100_bases
ATCCTGCCCCTTATCGGGCTGGATCAAGTCGGAATAGTCGATCATGCCCGCCGTGCTAGGCCGATCGGGATATTTTGTCG
ATTCCCGGCGTTATGCCTGC

Downstream 100 bases:

>100_bases
CGAACCAACACGACACAGGAAGGGAGACACATTATGCCCGCCAGATCGAAAGCCCAGCAGAAAGCGGCGGGTGCCGCACT
CAGCGCCAGGCGTGGTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTNKRPWRNAVSLLAGALLLAGCSEDRPTQVEKMVAAAVPGAPPTAAADEAAKNASASKVSESSDLIEFTYSYPADAARI
PELAEALDSDRAAKRAALIAAAERAKAAAEKNDHPYRPHSHRQTWQRVTNTPRFLSLSAEIDTYTGGAHGMEVFDTLLWD
RGRRKRMKPLDLFESSAAFDAAVREAFCAGIKRAKAAKGIAAAEAPDSPFAKCPPASAQTVWIGSSDGRYLDRLTIAIAP
YEVGPYAEGSYRINVPITGAVAKVVKDEFARNIMPINQP

Sequences:

>Translated_279_residues
MTNKRPWRNAVSLLAGALLLAGCSEDRPTQVEKMVAAAVPGAPPTAAADEAAKNASASKVSESSDLIEFTYSYPADAARI
PELAEALDSDRAAKRAALIAAAERAKAAAEKNDHPYRPHSHRQTWQRVTNTPRFLSLSAEIDTYTGGAHGMEVFDTLLWD
RGRRKRMKPLDLFESSAAFDAAVREAFCAGIKRAKAAKGIAAAEAPDSPFAKCPPASAQTVWIGSSDGRYLDRLTIAIAP
YEVGPYAEGSYRINVPITGAVAKVVKDEFARNIMPINQP
>Mature_278_residues
TNKRPWRNAVSLLAGALLLAGCSEDRPTQVEKMVAAAVPGAPPTAAADEAAKNASASKVSESSDLIEFTYSYPADAARIP
ELAEALDSDRAAKRAALIAAAERAKAAAEKNDHPYRPHSHRQTWQRVTNTPRFLSLSAEIDTYTGGAHGMEVFDTLLWDR
GRRKRMKPLDLFESSAAFDAAVREAFCAGIKRAKAAKGIAAAEAPDSPFAKCPPASAQTVWIGSSDGRYLDRLTIAIAPY
EVGPYAEGSYRINVPITGAVAKVVKDEFARNIMPINQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29954; Mature: 29823

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKRPWRNAVSLLAGALLLAGCSEDRPTQVEKMVAAAVPGAPPTAAADEAAKNASASKV
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
SESSDLIEFTYSYPADAARIPELAEALDSDRAAKRAALIAAAERAKAAAEKNDHPYRPHS
CCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
HRQTWQRVTNTPRFLSLSAEIDTYTGGAHGMEVFDTLLWDRGRRKRMKPLDLFESSAAFD
HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHH
AAVREAFCAGIKRAKAAKGIAAAEAPDSPFAKCPPASAQTVWIGSSDGRYLDRLTIAIAP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEC
YEVGPYAEGSYRINVPITGAVAKVVKDEFARNIMPINQP
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNKRPWRNAVSLLAGALLLAGCSEDRPTQVEKMVAAAVPGAPPTAAADEAAKNASASKV
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
SESSDLIEFTYSYPADAARIPELAEALDSDRAAKRAALIAAAERAKAAAEKNDHPYRPHS
CCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
HRQTWQRVTNTPRFLSLSAEIDTYTGGAHGMEVFDTLLWDRGRRKRMKPLDLFESSAAFD
HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHH
AAVREAFCAGIKRAKAAKGIAAAEAPDSPFAKCPPASAQTVWIGSSDGRYLDRLTIAIAP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEC
YEVGPYAEGSYRINVPITGAVAKVVKDEFARNIMPINQP
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA