| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486197
Identifier: 103486197
GI number: 103486197
Start: 710389
End: 710706
Strand: Direct
Name: 103486197
Synonym: Sala_0704
Alternate gene names: NA
Gene position: 710389-710706 (Clockwise)
Preceding gene: 103486193
Following gene: 103486199
Centisome position: 21.24
GC content: 65.72
Gene sequence:
>318_bases ATGCGGCGCGATATAGTGGGGAAGGGAGAAAAGCGCAATTGCGCGCGAGAATCCTCCCTGTCGCGAAGCGATGGGGAGGA TCGTAACCTGCAAGGTCCGGAAACGGTCGGTTGCGGCCGTTGCGCTCCTCCCCGGAACGGGGAGGAACGGCAACTCACCG CCCCAAAACCGCCCCATCGCACACTGACAGGATCAGACCCCGCCGGACCCGCAGCAAGCCGGGGCCGCGATCGTGCCCTG ATCGCGGCCCCGGTGCTGACGAACCGTGCAACTTCGGTTCGCGGTCAGTTGCGGATCGAGCTGACCCGGATCGCCTGA
Upstream 100 bases:
>100_bases GATCGCATCGCGGCTGAGCCCGACCAGGTCGATACGATTGCCCCCGCGCAGCGGGACGGTGCCCGTCGTGACGGGGTCGA TATGGCCGGGAATCTGCATG
Downstream 100 bases:
>100_bases TTGCGGGTGGCGCCCGCTATCACAACGTCGGCCTGCGCCGACGCCAGGGCGCGCGTGTCGCGGCGGCACTGGCGGACGTC ATTCTTGCCGGCGAGGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MRRDIVGKGEKRNCARESSLSRSDGEDRNLQGPETVGCGRCAPPRNGEERQLTAPKPPHRTLTGSDPAGPAASRGRDRAL IAAPVLTNRATSVRGQLRIELTRIA
Sequences:
>Translated_105_residues MRRDIVGKGEKRNCARESSLSRSDGEDRNLQGPETVGCGRCAPPRNGEERQLTAPKPPHRTLTGSDPAGPAASRGRDRAL IAAPVLTNRATSVRGQLRIELTRIA >Mature_105_residues MRRDIVGKGEKRNCARESSLSRSDGEDRNLQGPETVGCGRCAPPRNGEERQLTAPKPPHRTLTGSDPAGPAASRGRDRAL IAAPVLTNRATSVRGQLRIELTRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11311; Mature: 11311
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDIVGKGEKRNCARESSLSRSDGEDRNLQGPETVGCGRCAPPRNGEERQLTAPKPPHR CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC TLTGSDPAGPAASRGRDRALIAAPVLTNRATSVRGQLRIELTRIA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MRRDIVGKGEKRNCARESSLSRSDGEDRNLQGPETVGCGRCAPPRNGEERQLTAPKPPHR CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC TLTGSDPAGPAASRGRDRALIAAPVLTNRATSVRGQLRIELTRIA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA