| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is tesA [C]
Identifier: 103486193
GI number: 103486193
Start: 707277
End: 707990
Strand: Direct
Name: tesA [C]
Synonym: Sala_0700
Alternate gene names: 103486193
Gene position: 707277-707990 (Clockwise)
Preceding gene: 103486190
Following gene: 103486197
Centisome position: 21.14
GC content: 64.57
Gene sequence:
>714_bases ATGAAAACGGCCGGATGGCGGTCTGCCTTGATATATGGTTGCGTCTTCGCGCTTTGCCAACCGCTTGCCGCCTGCGGCTC GGCGGAGGCGCCACCGGCATCGACGAACGACGGAAAGGCGGCGAAAGCCGTCCCCGCGATTCCCGCCGACGCACCGCTCG TCATTGCGTTCGGCGACAGCCTCTACGCCGGTTACCAGCTTGGGCCCAAAGAAGGACTGGCGCCGCAGCTTCAGGCCGCG CTCGCCGCCGACGGCGTCGTTGCGCGCGTTCAGAATGCCGGCGTGTCGGGCGATACGAGCGCCGCGGGCCGCCAGCGGCT GACCTATGTGCTCGACAATGCGAAGGTGAAGCCGACGCTCATCGTGCTGGGGCTCGGCGGCAACGACATGCTGCGTGGCA TCGGCCCCGACCAGACGCGCGCCAATCTCGACGCCATGCTCGCCGAGCTTCAAAGGCGCGACATTCCCGTACTGCTCACC GGCATGATGGCGGCGCCGAACCTTGGCAGCGACTATGCGGACAAGTTTAACGCCATCTTTCCCGATCTCGCCGCGAAATA TGACGTAAGCTTCTATCCCTTCATCCTCGACAATGTCGTCACCAATAAGGCGCTGATGCTCGGCGACAATCTCCATCCCA ATGCCAAGGGCGTGAAGGTCGTGGCCGACGCCCTCGCGCCGCTCGTCGAGCAGGCGCTGCCTGACGCGGAATAA
Upstream 100 bases:
>100_bases GGGGCCTTGTCGCTCCCCAGGGTCAGCGTCACATTATGAGCGGCAATCGCCAGATCCGGCGAAGGTCGGGAAACGTCGGT CAAGAAGGAACCCTTTGGAA
Downstream 100 bases:
>100_bases ATCCTCCCCATGGCTTCGCCACAGGGAGGATCAGAGCCTCAACCTCCCCGCGGCCCGAACAGGATGATCGCCGCGCCGCC CAGGCACACCGCGGCGCCGA
Product: lipolytic enzyme, G-D-S-L
Products: NA
Alternate protein names: Aryl-ester hydrolase [H]
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKTAGWRSALIYGCVFALCQPLAACGSAEAPPASTNDGKAAKAVPAIPADAPLVIAFGDSLYAGYQLGPKEGLAPQLQAA LAADGVVARVQNAGVSGDTSAAGRQRLTYVLDNAKVKPTLIVLGLGGNDMLRGIGPDQTRANLDAMLAELQRRDIPVLLT GMMAAPNLGSDYADKFNAIFPDLAAKYDVSFYPFILDNVVTNKALMLGDNLHPNAKGVKVVADALAPLVEQALPDAE
Sequences:
>Translated_237_residues MKTAGWRSALIYGCVFALCQPLAACGSAEAPPASTNDGKAAKAVPAIPADAPLVIAFGDSLYAGYQLGPKEGLAPQLQAA LAADGVVARVQNAGVSGDTSAAGRQRLTYVLDNAKVKPTLIVLGLGGNDMLRGIGPDQTRANLDAMLAELQRRDIPVLLT GMMAAPNLGSDYADKFNAIFPDLAAKYDVSFYPFILDNVVTNKALMLGDNLHPNAKGVKVVADALAPLVEQALPDAE >Mature_237_residues MKTAGWRSALIYGCVFALCQPLAACGSAEAPPASTNDGKAAKAVPAIPADAPLVIAFGDSLYAGYQLGPKEGLAPQLQAA LAADGVVARVQNAGVSGDTSAAGRQRLTYVLDNAKVKPTLIVLGLGGNDMLRGIGPDQTRANLDAMLAELQRRDIPVLLT GMMAAPNLGSDYADKFNAIFPDLAAKYDVSFYPFILDNVVTNKALMLGDNLHPNAKGVKVVADALAPLVEQALPDAE
Specific function: Favors the hydrolysis of several arylesters [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=187, Percent_Identity=34.2245989304813, Blast_Score=98, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.2 [H]
Molecular weight: Translated: 24559; Mature: 24559
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAGWRSALIYGCVFALCQPLAACGSAEAPPASTNDGKAAKAVPAIPADAPLVIAFGDS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LYAGYQLGPKEGLAPQLQAALAADGVVARVQNAGVSGDTSAAGRQRLTYVLDNAKVKPTL CCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCCEEE IVLGLGGNDMLRGIGPDQTRANLDAMLAELQRRDIPVLLTGMMAAPNLGSDYADKFNAIF EEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHHHH PDLAAKYDVSFYPFILDNVVTNKALMLGDNLHPNAKGVKVVADALAPLVEQALPDAE HHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTAGWRSALIYGCVFALCQPLAACGSAEAPPASTNDGKAAKAVPAIPADAPLVIAFGDS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC LYAGYQLGPKEGLAPQLQAALAADGVVARVQNAGVSGDTSAAGRQRLTYVLDNAKVKPTL CCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHEEEEECCCCCCEEE IVLGLGGNDMLRGIGPDQTRANLDAMLAELQRRDIPVLLTGMMAAPNLGSDYADKFNAIF EEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHHHHHHH PDLAAKYDVSFYPFILDNVVTNKALMLGDNLHPNAKGVKVVADALAPLVEQALPDAE HHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8141782 [H]