Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486190

Identifier: 103486190

GI number: 103486190

Start: 703555

End: 703920

Strand: Direct

Name: 103486190

Synonym: Sala_0697

Alternate gene names: NA

Gene position: 703555-703920 (Clockwise)

Preceding gene: 103486189

Following gene: 103486193

Centisome position: 21.03

GC content: 65.57

Gene sequence:

>366_bases
GTGATCCTGATCGACAGTTCGGTCTGGATCGATCATCTGCGCAGCGCCAATGCGGGGCTTGCGCTGGCGCTTGCCGAAGG
CCGCATCGTTCAGCACCCATTCGTCACCGCCGAGCTGGCGCTCGGCTCGCTGGCGAGCCGCGACCGGTTCGTCGCGATGC
TCGGCTTGCTTTCGCCCGCGCCAGTGGTCGAAAGCGCAAGATTGCTCGACTTCATAACGAACCACCGCCTGTTCGGCACC
GGACTCGGCATGGTCGATGCGCATCTGTTGGCATCGACCGCCGAGCTGGGCGCCGCACGGCTCTGGACGAGCGATCGGCG
GCTCGCGGAACAGGCGGAACGGCTCGGCCTTCTTTATCGACCCTGA

Upstream 100 bases:

>100_bases
CTGCCAGCGCGCTTATCCAGCGCGAGGCGGCACGAAAGCTGGCGTTGATGGGCGGTAGCGACCCCGGCGCGACAGCGGCG
CCGCGCGAGCGATCCGGCGC

Downstream 100 bases:

>100_bases
CGCCACCTCGCGTATAAGGATCAAAGACTCCGCAGCGCCTGCGCCGGTTTCACCGACAGCAAGGGCCAGCTTCCCGCGAT
GCCGATCAGGAAGGACAGGC

Product: PilT protein-like protein

Products: NA

Alternate protein names: PilT Protein-Like Protein; PilT Protein Domain Protein; PilT Protein-Like; PilT Protein Domain-Containing Protein; PIN-Domain Protein; Xin Of A Toxin/Antitoxin System PIN Domain

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT
GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP

Sequences:

>Translated_121_residues
MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT
GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP
>Mature_121_residues
MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT
GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13085; Mature: 13085

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPA
CEEECCHHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
PVVESARLLDFITNHRLFGTGLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYR
CHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
P
C
>Mature Secondary Structure
MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPA
CEEECCHHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCC
PVVESARLLDFITNHRLFGTGLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYR
CHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA