| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486190
Identifier: 103486190
GI number: 103486190
Start: 703555
End: 703920
Strand: Direct
Name: 103486190
Synonym: Sala_0697
Alternate gene names: NA
Gene position: 703555-703920 (Clockwise)
Preceding gene: 103486189
Following gene: 103486193
Centisome position: 21.03
GC content: 65.57
Gene sequence:
>366_bases GTGATCCTGATCGACAGTTCGGTCTGGATCGATCATCTGCGCAGCGCCAATGCGGGGCTTGCGCTGGCGCTTGCCGAAGG CCGCATCGTTCAGCACCCATTCGTCACCGCCGAGCTGGCGCTCGGCTCGCTGGCGAGCCGCGACCGGTTCGTCGCGATGC TCGGCTTGCTTTCGCCCGCGCCAGTGGTCGAAAGCGCAAGATTGCTCGACTTCATAACGAACCACCGCCTGTTCGGCACC GGACTCGGCATGGTCGATGCGCATCTGTTGGCATCGACCGCCGAGCTGGGCGCCGCACGGCTCTGGACGAGCGATCGGCG GCTCGCGGAACAGGCGGAACGGCTCGGCCTTCTTTATCGACCCTGA
Upstream 100 bases:
>100_bases CTGCCAGCGCGCTTATCCAGCGCGAGGCGGCACGAAAGCTGGCGTTGATGGGCGGTAGCGACCCCGGCGCGACAGCGGCG CCGCGCGAGCGATCCGGCGC
Downstream 100 bases:
>100_bases CGCCACCTCGCGTATAAGGATCAAAGACTCCGCAGCGCCTGCGCCGGTTTCACCGACAGCAAGGGCCAGCTTCCCGCGAT GCCGATCAGGAAGGACAGGC
Product: PilT protein-like protein
Products: NA
Alternate protein names: PilT Protein-Like Protein; PilT Protein Domain Protein; PilT Protein-Like; PilT Protein Domain-Containing Protein; PIN-Domain Protein; Xin Of A Toxin/Antitoxin System PIN Domain
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP
Sequences:
>Translated_121_residues MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP >Mature_121_residues MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPAPVVESARLLDFITNHRLFGT GLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYRP
Specific function: Unknown
COG id: COG1487
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13085; Mature: 13085
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPA CEEECCHHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCC PVVESARLLDFITNHRLFGTGLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYR CHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC P C >Mature Secondary Structure MILIDSSVWIDHLRSANAGLALALAEGRIVQHPFVTAELALGSLASRDRFVAMLGLLSPA CEEECCHHHHHHHHCCCCCEEEEEECCEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCC PVVESARLLDFITNHRLFGTGLGMVDAHLLASTAELGAARLWTSDRRLAEQAERLGLLYR CHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA