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The map label for this gene is sufB [C]

Identifier: 103486167

GI number: 103486167

Start: 682492

End: 683979

Strand: Reverse

Name: sufB [C]

Synonym: Sala_0674

Alternate gene names: 103486167

Gene position: 683979-682492 (Counterclockwise)

Preceding gene: 103486168

Following gene: 103486166

Centisome position: 20.45

GC content: 62.3

Gene sequence:

>1488_bases
ATGATCGACAACACCGAAACCCGCATCAAGGACCAGGCCGCGCACGCCGCCGCCGCCAGGGTCGCCGATTATGAACATGG
CTGGTCCGCCGACATCGAGACCGACTTCGCGCCCAAGGGGCTGACCGAGGATACGGTCCGCTTCATCTCGGCCAAGAAGA
ACGAGCCCGAATGGATGCTCGACTGGCGGCTGAAGGCGTTCCGCCACTGGCAGACGATGGAAACGCCCGACTGGGCGAAG
CTCAACGTGCCGCCGATCGATTATCAGGACGCATACTATTATGCGGCGCCCAAGCCGAAGCCGAAGCTGTCCAGCCTCGA
CGAGGTCGATCCCGAAATCCTCGAAGTCTACAGGAAGCTCGGCATCCCGATCGAGGAGCAGAAGGTGCTCGCGGGGGTCG
AGGGCGCGCGCAAGGTCGCGGTCGACGCGGTGTTCGACAGCGTCAGCGTCGCGACGACCTTTCGCGAGGAACTGAAGCGC
GCGGGGGTGATCTTCCTCTCGATTTCCGAAGCGATCCGCGAATATCCCGAGCTGGTGAAAAAATGGCTTGGGCGTGTCGT
GCCGATGCACGACAATTATTTCGCGACGCTCAATTGCGCGGTCTTTTCGGACGGCACCTTTGTCTATGTGCCCGAGGGCG
TGCGCTGCCCGATGGAGCTCAGCACCTATTTCCGCATCAATGCCGAGAATACGGGGCAGTTCGAGCGCACGCTGATCGTC
GCCGACAAGGGCGCTTATGTGTCCTATCTCGAAGGCTGCACCGCGCCGATGCGCGACGAGAACCAGCTCCACGCCGCGGT
GGTCGAGCTGGTCGCGCTCGACGATGCCGAGATCAAGTACAGCACCGTGCAGAACTGGTACCCTGGCAATGCCGAAGGGC
TGGGCGGCATCTATAATTTCGTGACCAAGCGCGCGCTGTGCCAGGGCAAGCGCAGCAAGGTGTCGTGGACGCAGGTCGAA
ACCGGCTCTGCGATCACCTGGAAATACCCAAGCTGTGTGCTCAACGGCGACGACAGCGTCGGCGAATTCTACTCGGTCGC
GGTCACCAACAATTTTCAGCAGGCCGACACCGGCACCAAGATGATCCACAATGGCAAGCGCACGCGCTCAACCATCGTGT
CGAAGGGGATCAGCGCGGGCAAGTCGAACAACACCTATCGCGGCCTCGTCCGCGTCGCGCCGAATGCCGAGGGGGTGCGC
AACTTCACCCAGTGCGACAGTTTGCTGCTCGGCGACCGGTGCGGCGCGCATACCGTGCCCTATATCGAAGTCCGCAACCC
GACCGCCACGGTCGAGCATGAAGCGACGACGAGCAAGATCAGCGACGACCAGCTCTTCTACGCCATGCAGCGCGGGCTGG
GGCAGGAAGAGGCGGTGGCGCTGATCGTCAACGGCTTTGCCAAGGAAGTGTTGCAGCAGCTGCCGATGGAGTTTGCGGTC
GAGGCGCAGAAATTGCTGGGGATCAGCCTCGAAGGGAGCGTGGGGTGA

Upstream 100 bases:

>100_bases
GCGAAGGGTGCCGGGAGTCACGTGCCTCCCGGCACGGCCGCTGGAGGTCACGCACAAACGATAGCGGCCCCCGCCTTCGC
GGGGGCGACGAGTTAAAGAT

Downstream 100 bases:

>100_bases
CAAGCCTTTCGCCCACGGATCAAGCCAAGCGCCTATCCACCCCTCCCCTTCAGGGGAGGGGCCGGGGGTGGGGGCTATCG
GCCTTGGACATCGCCGAACT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MIDNTETRIKDQAAHAAAARVADYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWMLDWRLKAFRHWQTMETPDWAK
LNVPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKLGIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFREELKR
AGVIFLSISEAIREYPELVKKWLGRVVPMHDNYFATLNCAVFSDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIV
ADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNFVTKRALCQGKRSKVSWTQVE
TGSAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTKMIHNGKRTRSTIVSKGISAGKSNNTYRGLVRVAPNAEGVR
NFTQCDSLLLGDRCGAHTVPYIEVRNPTATVEHEATTSKISDDQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAV
EAQKLLGISLEGSVG

Sequences:

>Translated_495_residues
MIDNTETRIKDQAAHAAAARVADYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWMLDWRLKAFRHWQTMETPDWAK
LNVPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKLGIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFREELKR
AGVIFLSISEAIREYPELVKKWLGRVVPMHDNYFATLNCAVFSDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIV
ADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNFVTKRALCQGKRSKVSWTQVE
TGSAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTKMIHNGKRTRSTIVSKGISAGKSNNTYRGLVRVAPNAEGVR
NFTQCDSLLLGDRCGAHTVPYIEVRNPTATVEHEATTSKISDDQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAV
EAQKLLGISLEGSVG
>Mature_495_residues
MIDNTETRIKDQAAHAAAARVADYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWMLDWRLKAFRHWQTMETPDWAK
LNVPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKLGIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFREELKR
AGVIFLSISEAIREYPELVKKWLGRVVPMHDNYFATLNCAVFSDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIV
ADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNFVTKRALCQGKRSKVSWTQVE
TGSAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTKMIHNGKRTRSTIVSKGISAGKSNNTYRGLVRVAPNAEGVR
NFTQCDSLLLGDRCGAHTVPYIEVRNPTATVEHEATTSKISDDQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAV
EAQKLLGISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=486, Percent_Identity=60.4938271604938, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=30.0653594771242, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55019; Mature: 55019

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDNTETRIKDQAAHAAAARVADYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWML
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEH
DWRLKAFRHWQTMETPDWAKLNVPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
GIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFREELKRAGVIFLSISEAIREYPELVK
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH
KWLGRVVPMHDNYFATLNCAVFSDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIV
HHHCCEECCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
ADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNF
ECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCCHHHHH
VTKRALCQGKRSKVSWTQVETGSAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTK
HHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCHHCCCCHH
MIHNGKRTRSTIVSKGISAGKSNNTYRGLVRVAPNAEGVRNFTQCDSLLLGDRCGAHTVP
HHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
YIEVRNPTATVEHEATTSKISDDQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAV
EEEECCCCCEEECCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
EAQKLLGISLEGSVG
HHHHHHEEEECCCCC
>Mature Secondary Structure
MIDNTETRIKDQAAHAAAARVADYEHGWSADIETDFAPKGLTEDTVRFISAKKNEPEWML
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEH
DWRLKAFRHWQTMETPDWAKLNVPPIDYQDAYYYAAPKPKPKLSSLDEVDPEILEVYRKL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH
GIPIEEQKVLAGVEGARKVAVDAVFDSVSVATTFREELKRAGVIFLSISEAIREYPELVK
CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH
KWLGRVVPMHDNYFATLNCAVFSDGTFVYVPEGVRCPMELSTYFRINAENTGQFERTLIV
HHHCCEECCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEE
ADKGAYVSYLEGCTAPMRDENQLHAAVVELVALDDAEIKYSTVQNWYPGNAEGLGGIYNF
ECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCCCCCHHHHH
VTKRALCQGKRSKVSWTQVETGSAITWKYPSCVLNGDDSVGEFYSVAVTNNFQQADTGTK
HHHHHHHCCCCCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCHHCCCCHH
MIHNGKRTRSTIVSKGISAGKSNNTYRGLVRVAPNAEGVRNFTQCDSLLLGDRCGAHTVP
HHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC
YIEVRNPTATVEHEATTSKISDDQLFYAMQRGLGQEEAVALIVNGFAKEVLQQLPMEFAV
EEEECCCCCEEECCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
EAQKLLGISLEGSVG
HHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]