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The map label for this gene is yfhF [C]

Identifier: 103486160

GI number: 103486160

Start: 677582

End: 677938

Strand: Reverse

Name: yfhF [C]

Synonym: Sala_0667

Alternate gene names: 103486160

Gene position: 677938-677582 (Counterclockwise)

Preceding gene: 103486161

Following gene: 103486159

Centisome position: 20.27

GC content: 63.31

Gene sequence:

>357_bases
ATGACCGACACCAAAACCCGCACCCGCCCCGCGGCGGTGACTCTGACGCCCAACGCCGAAGCGCGCATCGCCAGGCTGAT
GGCGGCCGCACCCGACGGCGCGATCGGCGTCAAGCTGTCGACGCCGCGCCGCGGCTGTTCGGGGCTCGCCTACTCGGTTG
ATTATGTGACCGAAGAAGAAAAGTTCGACGAGAAGATCGAAACGCCTGGCGGTGTATTCTACATCGACGGCGCGTCGGTA
CTCTATCTGATCGGCAGCACGATGGACTGGGTCGAGGATGATTTTGCCGCGGGCTTTGTCTTCGACAATCCGAACGCCAA
GGGCGCCTGCGGCTGCGGCGAGAGCTTTACCGTCTGA

Upstream 100 bases:

>100_bases
CTGCCCGGTCGTAGTGGGGTGGGGCCTATCGGCCTTGCTCAAGGCCGATAGGCCCCACCCCAACCCCTCCCCTGAAGGGG
AGGGGGTTTGGAGATTGAAG

Downstream 100 bases:

>100_bases
CGATGAAAGTGCGGGAGGCGCAATCGCGGGACATCGCCGCCTGGGCGGCCATGCGCGCGCGGCTCTGGCCCGATGCCGAT
GCCGCGGAACTGGCCGACGA

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTDTKTRTRPAAVTLTPNAEARIARLMAAAPDGAIGVKLSTPRRGCSGLAYSVDYVTEEEKFDEKIETPGGVFYIDGASV
LYLIGSTMDWVEDDFAAGFVFDNPNAKGACGCGESFTV

Sequences:

>Translated_118_residues
MTDTKTRTRPAAVTLTPNAEARIARLMAAAPDGAIGVKLSTPRRGCSGLAYSVDYVTEEEKFDEKIETPGGVFYIDGASV
LYLIGSTMDWVEDDFAAGFVFDNPNAKGACGCGESFTV
>Mature_117_residues
TDTKTRTRPAAVTLTPNAEARIARLMAAAPDGAIGVKLSTPRRGCSGLAYSVDYVTEEEKFDEKIETPGGVFYIDGASVL
YLIGSTMDWVEDDFAAGFVFDNPNAKGACGCGESFTV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=117, Percent_Identity=41.8803418803419, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=39.2523364485981, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=37.3831775700935, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=30.188679245283, Blast_Score=62, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=43.859649122807, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI193209025, Length=108, Percent_Identity=44.4444444444444, Blast_Score=105, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=47.2222222222222, Blast_Score=109, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=46.2962962962963, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12537; Mature: 12406

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTKTRTRPAAVTLTPNAEARIARLMAAAPDGAIGVKLSTPRRGCSGLAYSVDYVTEEE
CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCH
KFDEKIETPGGVFYIDGASVLYLIGSTMDWVEDDFAAGFVFDNPNAKGACGCGESFTV
HHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDTKTRTRPAAVTLTPNAEARIARLMAAAPDGAIGVKLSTPRRGCSGLAYSVDYVTEEE
CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCH
KFDEKIETPGGVFYIDGASVLYLIGSTMDWVEDDFAAGFVFDNPNAKGACGCGESFTV
HHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]