| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is mgtA [H]
Identifier: 103486129
GI number: 103486129
Start: 647858
End: 648910
Strand: Reverse
Name: mgtA [H]
Synonym: Sala_0636
Alternate gene names: 103486129
Gene position: 648910-647858 (Counterclockwise)
Preceding gene: 103486130
Following gene: 103486127
Centisome position: 19.4
GC content: 69.71
Gene sequence:
>1053_bases ATGAGGATATTGATCGTCACCGATGCGTGGGAGCCGCAGGTCAACGGGGTCGTCCGCACCCTGCAGGCGACAATTGCCGA GCTGCGCGCCGCGGGGCATGAGGTCGGCGTCATCTCGCCCGACCTGTTCCGGTCGATCCCCTGCCCCTCCTATGGCGAAA TCCGCCTTGCCTTTGCCGGGCGGCGCGCGGTGGGGCGCCGAATCCGCGCCTTTGCGCCGCAGGCGATCCATATCTCGACC GAAGGGCCGCTGGGGCTCGCGGCGCGGCGCTGGTGCCTCGATAAGGGCTTTCCCTTCACCACCGCCTATCACACCCGCTT TCCCGAATATGTCGCGGCGCGCCTGCCCGTGTCGCCCGCCCTTGTCTGGCGCTTCATCCGCTGGTTCCACCGCCCGGCGC GGCACATCATGGTCGCGACGCGCAGCCTGGCGCGCGAACTCGCCGATCGGGGCCTTGCCCAAACGATGATGTGGGAACGC GGCGTCGATCATGCGCTCTTCCGACCCGACCGTGCTGCGCACCCCGCCTTTGACGGGCTGGCGCGCCCGATCCAGCTTTA TGTCGGCCGCGTGGCGGTCGAGAAGAATATCGGCGCATTCCTCGACTGCGACCGCCCCGGCACGAAAGTCGTCGTCGGCG ACGGTCCCGCGCTCGCCGACCTCAAGGCCCGCCATCCCGACGCGCTGTTCCTCGGCAAGCTTGGCGGCGAGACGCTCGCT TCGGCCTATGCGGGTGCCGATGTGTTCGTCTTTCCAAGTCGCACCGACACCTTCGGCCTTGTCGTGATCGAAGCCCTGAG CTGCGGCACGCCGGTTGCCGCCTATCCGGTGCCGGGACCGGGCGACATTGTGACCGACGGCGCCGGCGCGCTCGACGAAG ACCTGGGCCGCGCAATCGACCGCGCGCTGGCCTGCGACCGCAGCGATGCCGCCGCGCTCGGCGCGCGATACAGCTGGGCG GGATGCACCGCGCAGTTCGCGCGCGCGCTGTCCTTCGTTCCCGCCGACTCCGTGTCGGAGACCGCGATCGGGACGGCAGG CGTCGCAGCCTAG
Upstream 100 bases:
>100_bases CGCTTGTCGAACATCATGACGGCACCATGGAAATCCTGCATTGGGCGAAGGAAGTCGCCGCGCGCAACGCGCCGACCCAG TTGATGCTGCCCGCCGCCGC
Downstream 100 bases:
>100_bases AAAGTCTTGCGCCACTCCAGCTCGATATAGCGGCCCAGGGGGTCGATATATCCTGGCTGATAGTTCAGCGGCACCACCCC ATTCGCGTCGGTGATCTTGC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRILIVTDAWEPQVNGVVRTLQATIAELRAAGHEVGVISPDLFRSIPCPSYGEIRLAFAGRRAVGRRIRAFAPQAIHIST EGPLGLAARRWCLDKGFPFTTAYHTRFPEYVAARLPVSPALVWRFIRWFHRPARHIMVATRSLARELADRGLAQTMMWER GVDHALFRPDRAAHPAFDGLARPIQLYVGRVAVEKNIGAFLDCDRPGTKVVVGDGPALADLKARHPDALFLGKLGGETLA SAYAGADVFVFPSRTDTFGLVVIEALSCGTPVAAYPVPGPGDIVTDGAGALDEDLGRAIDRALACDRSDAAALGARYSWA GCTAQFARALSFVPADSVSETAIGTAGVAA
Sequences:
>Translated_350_residues MRILIVTDAWEPQVNGVVRTLQATIAELRAAGHEVGVISPDLFRSIPCPSYGEIRLAFAGRRAVGRRIRAFAPQAIHIST EGPLGLAARRWCLDKGFPFTTAYHTRFPEYVAARLPVSPALVWRFIRWFHRPARHIMVATRSLARELADRGLAQTMMWER GVDHALFRPDRAAHPAFDGLARPIQLYVGRVAVEKNIGAFLDCDRPGTKVVVGDGPALADLKARHPDALFLGKLGGETLA SAYAGADVFVFPSRTDTFGLVVIEALSCGTPVAAYPVPGPGDIVTDGAGALDEDLGRAIDRALACDRSDAAALGARYSWA GCTAQFARALSFVPADSVSETAIGTAGVAA >Mature_350_residues MRILIVTDAWEPQVNGVVRTLQATIAELRAAGHEVGVISPDLFRSIPCPSYGEIRLAFAGRRAVGRRIRAFAPQAIHIST EGPLGLAARRWCLDKGFPFTTAYHTRFPEYVAARLPVSPALVWRFIRWFHRPARHIMVATRSLARELADRGLAQTMMWER GVDHALFRPDRAAHPAFDGLARPIQLYVGRVAVEKNIGAFLDCDRPGTKVVVGDGPALADLKARHPDALFLGKLGGETLA SAYAGADVFVFPSRTDTFGLVVIEALSCGTPVAAYPVPGPGDIVTDGAGALDEDLGRAIDRALACDRSDAAALGARYSWA GCTAQFARALSFVPADSVSETAIGTAGVAA
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 37494; Mature: 37494
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIVTDAWEPQVNGVVRTLQATIAELRAAGHEVGVISPDLFRSIPCPSYGEIRLAFAG CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECC RRAVGRRIRAFAPQAIHISTEGPLGLAARRWCLDKGFPFTTAYHTRFPEYVAARLPVSPA CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCHH LVWRFIRWFHRPARHIMVATRSLARELADRGLAQTMMWERGVDHALFRPDRAAHPAFDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHH ARPIQLYVGRVAVEKNIGAFLDCDRPGTKVVVGDGPALADLKARHPDALFLGKLGGETLA HHHHHHHHHHHHEECCCCCEEECCCCCCEEEECCCCCCCCHHCCCCCEEEEECCCCHHHH SAYAGADVFVFPSRTDTFGLVVIEALSCGTPVAAYPVPGPGDIVTDGAGALDEDLGRAID HHHCCCEEEEECCCCCCHHHHHEEHHHCCCCCEECCCCCCCCEEECCCCCHHHHHHHHHH RALACDRSDAAALGARYSWAGCTAQFARALSFVPADSVSETAIGTAGVAA HHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MRILIVTDAWEPQVNGVVRTLQATIAELRAAGHEVGVISPDLFRSIPCPSYGEIRLAFAG CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEECC RRAVGRRIRAFAPQAIHISTEGPLGLAARRWCLDKGFPFTTAYHTRFPEYVAARLPVSPA CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCHH LVWRFIRWFHRPARHIMVATRSLARELADRGLAQTMMWERGVDHALFRPDRAAHPAFDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHH ARPIQLYVGRVAVEKNIGAFLDCDRPGTKVVVGDGPALADLKARHPDALFLGKLGGETLA HHHHHHHHHHHHEECCCCCEEECCCCCCEEEECCCCCCCCHHCCCCCEEEEECCCCHHHH SAYAGADVFVFPSRTDTFGLVVIEALSCGTPVAAYPVPGPGDIVTDGAGALDEDLGRAID HHHCCCEEEEECCCCCCHHHHHEEHHHCCCCCEECCCCCCCCEEECCCCCHHHHHHHHHH RALACDRSDAAALGARYSWAGCTAQFARALSFVPADSVSETAIGTAGVAA HHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10531370; 9634230; 12218036 [H]